Protein–RNA interactions for Protein: Q9UQ90

SPG7, Paraplegin, humanhuman

Predictions only

Length 795 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7Q9UQ90 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
SPG7Q9UQ90 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
SPG7Q9UQ90 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC26.35■■□□□ 1.81
SPG7Q9UQ90 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
SPG7Q9UQ90 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC26.35■■□□□ 1.81
SPG7Q9UQ90 DECR2-212ENST00000627716 352 ntTSL 2 BASIC26.35■■□□□ 1.81
SPG7Q9UQ90 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC26.35■■□□□ 1.81
SPG7Q9UQ90 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC26.35■■□□□ 1.81
SPG7Q9UQ90 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC26.35■■□□□ 1.81
SPG7Q9UQ90 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC26.35■■□□□ 1.81
SPG7Q9UQ90 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC26.35■■□□□ 1.81
SPG7Q9UQ90 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC26.35■■□□□ 1.81
SPG7Q9UQ90 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC26.35■■□□□ 1.81
SPG7Q9UQ90 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC26.35■■□□□ 1.81
SPG7Q9UQ90 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
SPG7Q9UQ90 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC26.34■■□□□ 1.81
SPG7Q9UQ90 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC26.34■■□□□ 1.81
SPG7Q9UQ90 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
SPG7Q9UQ90 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC26.34■■□□□ 1.81
SPG7Q9UQ90 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC26.34■■□□□ 1.81
SPG7Q9UQ90 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC26.34■■□□□ 1.81
SPG7Q9UQ90 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
SPG7Q9UQ90 AC079834.2-201ENST00000609776 1949 ntBASIC26.34■■□□□ 1.81
SPG7Q9UQ90 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
SPG7Q9UQ90 AP002982.1-201ENST00000492365 877 ntBASIC26.34■■□□□ 1.81
SPG7Q9UQ90 TK2-213ENST00000563369 882 ntTSL 5 BASIC26.34■■□□□ 1.81
SPG7Q9UQ90 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC26.34■■□□□ 1.81
SPG7Q9UQ90 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
SPG7Q9UQ90 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
SPG7Q9UQ90 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC26.34■■□□□ 1.81
SPG7Q9UQ90 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC26.34■■□□□ 1.81
SPG7Q9UQ90 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC26.33■■□□□ 1.81
SPG7Q9UQ90 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC26.33■■□□□ 1.81
SPG7Q9UQ90 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
SPG7Q9UQ90 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC26.33■■□□□ 1.81
SPG7Q9UQ90 NUDT16P1-203ENST00000513809 620 ntBASIC26.33■■□□□ 1.81
SPG7Q9UQ90 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC26.33■■□□□ 1.81
SPG7Q9UQ90 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC26.33■■□□□ 1.81
SPG7Q9UQ90 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC26.33■■□□□ 1.81
SPG7Q9UQ90 AL031963.3-201ENST00000606441 850 ntBASIC26.33■■□□□ 1.81
SPG7Q9UQ90 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC26.33■■□□□ 1.81
SPG7Q9UQ90 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC26.33■■□□□ 1.81
SPG7Q9UQ90 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC26.33■■□□□ 1.81
SPG7Q9UQ90 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC26.33■■□□□ 1.81
SPG7Q9UQ90 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
SPG7Q9UQ90 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC26.33■■□□□ 1.8
SPG7Q9UQ90 KRT8P20-201ENST00000423953 1409 ntBASIC26.32■■□□□ 1.8
SPG7Q9UQ90 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
SPG7Q9UQ90 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
SPG7Q9UQ90 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
SPG7Q9UQ90 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
SPG7Q9UQ90 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
SPG7Q9UQ90 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC26.32■■□□□ 1.8
SPG7Q9UQ90 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC26.32■■□□□ 1.8
SPG7Q9UQ90 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
SPG7Q9UQ90 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
SPG7Q9UQ90 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
SPG7Q9UQ90 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
SPG7Q9UQ90 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC26.31■■□□□ 1.8
SPG7Q9UQ90 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
SPG7Q9UQ90 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
SPG7Q9UQ90 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
SPG7Q9UQ90 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC26.31■■□□□ 1.8
SPG7Q9UQ90 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
SPG7Q9UQ90 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC26.31■■□□□ 1.8
SPG7Q9UQ90 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
SPG7Q9UQ90 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
SPG7Q9UQ90 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
SPG7Q9UQ90 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
SPG7Q9UQ90 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC26.31■■□□□ 1.8
SPG7Q9UQ90 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC26.3■■□□□ 1.8
SPG7Q9UQ90 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
SPG7Q9UQ90 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
SPG7Q9UQ90 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
SPG7Q9UQ90 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC26.3■■□□□ 1.8
SPG7Q9UQ90 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC26.3■■□□□ 1.8
SPG7Q9UQ90 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC26.3■■□□□ 1.8
SPG7Q9UQ90 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
SPG7Q9UQ90 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC26.3■■□□□ 1.8
SPG7Q9UQ90 RBM17P1-201ENST00000453646 1190 ntBASIC26.3■■□□□ 1.8
SPG7Q9UQ90 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC26.3■■□□□ 1.8
SPG7Q9UQ90 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
SPG7Q9UQ90 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
SPG7Q9UQ90 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC26.3■■□□□ 1.8
SPG7Q9UQ90 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC26.3■■□□□ 1.8
SPG7Q9UQ90 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
SPG7Q9UQ90 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC26.3■■□□□ 1.8
SPG7Q9UQ90 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
SPG7Q9UQ90 BID-212ENST00000614949 1988 ntTSL 5 BASIC26.29■■□□□ 1.8
SPG7Q9UQ90 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
SPG7Q9UQ90 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC26.29■■□□□ 1.8
SPG7Q9UQ90 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
SPG7Q9UQ90 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
SPG7Q9UQ90 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC26.29■■□□□ 1.8
SPG7Q9UQ90 REXO1L10P-201ENST00000615707 1290 ntBASIC26.29■■□□□ 1.8
SPG7Q9UQ90 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC26.29■■□□□ 1.8
SPG7Q9UQ90 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
SPG7Q9UQ90 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
SPG7Q9UQ90 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC26.29■■□□□ 1.8
SPG7Q9UQ90 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC26.29■■□□□ 1.8
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms