Protein–RNA interactions for Protein: Q9UMQ6

CAPN11, Calpain-11, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN11Q9UMQ6 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CAPN11Q9UMQ6 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
CAPN11Q9UMQ6 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC21.69■■□□□ 1.06
CAPN11Q9UMQ6 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CAPN11Q9UMQ6 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CAPN11Q9UMQ6 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CAPN11Q9UMQ6 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
CAPN11Q9UMQ6 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
CAPN11Q9UMQ6 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CAPN11Q9UMQ6 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC21.69■■□□□ 1.06
CAPN11Q9UMQ6 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CAPN11Q9UMQ6 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC21.69■■□□□ 1.06
CAPN11Q9UMQ6 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
CAPN11Q9UMQ6 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
CAPN11Q9UMQ6 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC21.69■■□□□ 1.06
CAPN11Q9UMQ6 AL591742.1-201ENST00000604433 565 ntBASIC21.69■■□□□ 1.06
CAPN11Q9UMQ6 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC21.69■■□□□ 1.06
CAPN11Q9UMQ6 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC21.69■■□□□ 1.06
CAPN11Q9UMQ6 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CAPN11Q9UMQ6 PTBP1P-201ENST00000554374 1601 ntBASIC21.69■■□□□ 1.06
CAPN11Q9UMQ6 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
CAPN11Q9UMQ6 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CAPN11Q9UMQ6 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC21.68■■□□□ 1.06
CAPN11Q9UMQ6 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
CAPN11Q9UMQ6 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
CAPN11Q9UMQ6 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC21.68■■□□□ 1.06
CAPN11Q9UMQ6 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC21.68■■□□□ 1.06
CAPN11Q9UMQ6 PARP1-202ENST00000366792 553 ntTSL 3 BASIC21.68■■□□□ 1.06
CAPN11Q9UMQ6 TERF1P5-201ENST00000477545 1207 ntBASIC21.68■■□□□ 1.06
CAPN11Q9UMQ6 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CAPN11Q9UMQ6 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
CAPN11Q9UMQ6 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CAPN11Q9UMQ6 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CAPN11Q9UMQ6 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC21.68■■□□□ 1.06
CAPN11Q9UMQ6 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC21.68■■□□□ 1.06
CAPN11Q9UMQ6 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC21.68■■□□□ 1.06
CAPN11Q9UMQ6 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CAPN11Q9UMQ6 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
CAPN11Q9UMQ6 PWWP2AP1-201ENST00000429776 2273 ntBASIC21.67■■□□□ 1.06
CAPN11Q9UMQ6 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CAPN11Q9UMQ6 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC21.67■■□□□ 1.06
CAPN11Q9UMQ6 GOLGA2P11-201ENST00000562660 1621 ntBASIC21.67■■□□□ 1.06
CAPN11Q9UMQ6 AC009237.14-201ENST00000609975 1594 ntBASIC21.67■■□□□ 1.06
CAPN11Q9UMQ6 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC21.67■■□□□ 1.06
CAPN11Q9UMQ6 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CAPN11Q9UMQ6 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
CAPN11Q9UMQ6 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CAPN11Q9UMQ6 UQCRFS1P1-201ENST00000435169 820 ntBASIC21.67■■□□□ 1.06
CAPN11Q9UMQ6 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC21.67■■□□□ 1.06
CAPN11Q9UMQ6 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC21.67■■□□□ 1.06
CAPN11Q9UMQ6 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CAPN11Q9UMQ6 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CAPN11Q9UMQ6 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CAPN11Q9UMQ6 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
CAPN11Q9UMQ6 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CAPN11Q9UMQ6 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CAPN11Q9UMQ6 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC21.66■■□□□ 1.06
CAPN11Q9UMQ6 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
CAPN11Q9UMQ6 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CAPN11Q9UMQ6 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
CAPN11Q9UMQ6 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC21.66■■□□□ 1.06
CAPN11Q9UMQ6 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC21.66■■□□□ 1.06
CAPN11Q9UMQ6 AL020996.1-203ENST00000536896 2307 ntBASIC21.66■■□□□ 1.06
CAPN11Q9UMQ6 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
CAPN11Q9UMQ6 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CAPN11Q9UMQ6 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC21.66■■□□□ 1.06
CAPN11Q9UMQ6 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC21.66■■□□□ 1.06
CAPN11Q9UMQ6 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
CAPN11Q9UMQ6 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC21.66■■□□□ 1.06
CAPN11Q9UMQ6 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
CAPN11Q9UMQ6 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC21.66■■□□□ 1.06
CAPN11Q9UMQ6 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CAPN11Q9UMQ6 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
CAPN11Q9UMQ6 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CAPN11Q9UMQ6 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CAPN11Q9UMQ6 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC21.66■■□□□ 1.06
CAPN11Q9UMQ6 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CAPN11Q9UMQ6 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC21.65■■□□□ 1.06
CAPN11Q9UMQ6 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CAPN11Q9UMQ6 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CAPN11Q9UMQ6 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CAPN11Q9UMQ6 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CAPN11Q9UMQ6 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CAPN11Q9UMQ6 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
CAPN11Q9UMQ6 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC21.65■■□□□ 1.06
CAPN11Q9UMQ6 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC21.65■■□□□ 1.06
CAPN11Q9UMQ6 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC21.65■■□□□ 1.06
CAPN11Q9UMQ6 AL162412.1-201ENST00000567129 965 ntBASIC21.65■■□□□ 1.06
CAPN11Q9UMQ6 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CAPN11Q9UMQ6 AC010536.3-201ENST00000620306 533 ntBASIC21.65■■□□□ 1.06
CAPN11Q9UMQ6 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
CAPN11Q9UMQ6 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
CAPN11Q9UMQ6 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CAPN11Q9UMQ6 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CAPN11Q9UMQ6 AP000974.1-201ENST00000623909 2387 ntBASIC21.65■■□□□ 1.06
CAPN11Q9UMQ6 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC21.64■■□□□ 1.06
CAPN11Q9UMQ6 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
CAPN11Q9UMQ6 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
CAPN11Q9UMQ6 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
CAPN11Q9UMQ6 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC21.64■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms