Protein–RNA interactions for Protein: Q9HCP0

CSNK1G1, Casein kinase I isoform gamma-1, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G1Q9HCP0 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
CSNK1G1Q9HCP0 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
CSNK1G1Q9HCP0 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CSNK1G1Q9HCP0 AL162377.1-201ENST00000618844 1793 ntBASIC21.04■□□□□ 0.96
CSNK1G1Q9HCP0 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC21.04■□□□□ 0.96
CSNK1G1Q9HCP0 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CSNK1G1Q9HCP0 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CSNK1G1Q9HCP0 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CSNK1G1Q9HCP0 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CSNK1G1Q9HCP0 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CSNK1G1Q9HCP0 AC124283.5-201ENST00000624661 1809 ntBASIC21.04■□□□□ 0.96
CSNK1G1Q9HCP0 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CSNK1G1Q9HCP0 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CSNK1G1Q9HCP0 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC21.03■□□□□ 0.96
CSNK1G1Q9HCP0 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CSNK1G1Q9HCP0 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC21.03■□□□□ 0.96
CSNK1G1Q9HCP0 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CSNK1G1Q9HCP0 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CSNK1G1Q9HCP0 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CSNK1G1Q9HCP0 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
CSNK1G1Q9HCP0 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CSNK1G1Q9HCP0 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CSNK1G1Q9HCP0 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC21.03■□□□□ 0.96
CSNK1G1Q9HCP0 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CSNK1G1Q9HCP0 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC21.03■□□□□ 0.96
CSNK1G1Q9HCP0 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CSNK1G1Q9HCP0 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
CSNK1G1Q9HCP0 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC21.03■□□□□ 0.96
CSNK1G1Q9HCP0 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
CSNK1G1Q9HCP0 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CSNK1G1Q9HCP0 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC21.03■□□□□ 0.96
CSNK1G1Q9HCP0 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC21.03■□□□□ 0.96
CSNK1G1Q9HCP0 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CSNK1G1Q9HCP0 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC21.02■□□□□ 0.96
CSNK1G1Q9HCP0 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CSNK1G1Q9HCP0 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
CSNK1G1Q9HCP0 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CSNK1G1Q9HCP0 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC21.02■□□□□ 0.96
CSNK1G1Q9HCP0 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
CSNK1G1Q9HCP0 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC21.02■□□□□ 0.96
CSNK1G1Q9HCP0 RNF121-214ENST00000533380 870 ntTSL 3 BASIC21.02■□□□□ 0.96
CSNK1G1Q9HCP0 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC21.02■□□□□ 0.96
CSNK1G1Q9HCP0 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
CSNK1G1Q9HCP0 AL359736.2-201ENST00000621992 437 ntBASIC21.02■□□□□ 0.96
CSNK1G1Q9HCP0 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC21.02■□□□□ 0.96
CSNK1G1Q9HCP0 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CSNK1G1Q9HCP0 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CSNK1G1Q9HCP0 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.95
CSNK1G1Q9HCP0 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.95
CSNK1G1Q9HCP0 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.95
CSNK1G1Q9HCP0 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CSNK1G1Q9HCP0 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CSNK1G1Q9HCP0 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CSNK1G1Q9HCP0 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CSNK1G1Q9HCP0 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
CSNK1G1Q9HCP0 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC21.01■□□□□ 0.95
CSNK1G1Q9HCP0 AL512408.1-201ENST00000569378 2000 ntBASIC21.01■□□□□ 0.95
CSNK1G1Q9HCP0 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC21.01■□□□□ 0.95
CSNK1G1Q9HCP0 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC21.01■□□□□ 0.95
CSNK1G1Q9HCP0 RPPH1-201ENST00000516869 333 ntBASIC21.01■□□□□ 0.95
CSNK1G1Q9HCP0 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC21.01■□□□□ 0.95
CSNK1G1Q9HCP0 AC142381.4-202ENST00000563973 229 ntBASIC21.01■□□□□ 0.95
CSNK1G1Q9HCP0 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC21.01■□□□□ 0.95
CSNK1G1Q9HCP0 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC21.01■□□□□ 0.95
CSNK1G1Q9HCP0 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
CSNK1G1Q9HCP0 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CSNK1G1Q9HCP0 KRT16P6-202ENST00000425692 1426 ntBASIC21.01■□□□□ 0.95
CSNK1G1Q9HCP0 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CSNK1G1Q9HCP0 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CSNK1G1Q9HCP0 BX119927.1-201ENST00000636596 1552 ntBASIC21.01■□□□□ 0.95
CSNK1G1Q9HCP0 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC21.01■□□□□ 0.95
CSNK1G1Q9HCP0 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CSNK1G1Q9HCP0 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC21■□□□□ 0.95
CSNK1G1Q9HCP0 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CSNK1G1Q9HCP0 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC21■□□□□ 0.95
CSNK1G1Q9HCP0 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC21■□□□□ 0.95
CSNK1G1Q9HCP0 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC21■□□□□ 0.95
CSNK1G1Q9HCP0 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC21■□□□□ 0.95
CSNK1G1Q9HCP0 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC21■□□□□ 0.95
CSNK1G1Q9HCP0 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC21■□□□□ 0.95
CSNK1G1Q9HCP0 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC21■□□□□ 0.95
CSNK1G1Q9HCP0 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CSNK1G1Q9HCP0 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC21■□□□□ 0.95
CSNK1G1Q9HCP0 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CSNK1G1Q9HCP0 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
CSNK1G1Q9HCP0 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
CSNK1G1Q9HCP0 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CSNK1G1Q9HCP0 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC20.99■□□□□ 0.95
CSNK1G1Q9HCP0 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC20.99■□□□□ 0.95
CSNK1G1Q9HCP0 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
CSNK1G1Q9HCP0 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.99■□□□□ 0.95
CSNK1G1Q9HCP0 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC20.99■□□□□ 0.95
CSNK1G1Q9HCP0 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CSNK1G1Q9HCP0 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CSNK1G1Q9HCP0 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CSNK1G1Q9HCP0 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CSNK1G1Q9HCP0 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CSNK1G1Q9HCP0 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CSNK1G1Q9HCP0 SERF2-207ENST00000409614 582 ntTSL 2 BASIC20.99■□□□□ 0.95
CSNK1G1Q9HCP0 AC133681.1-201ENST00000465482 601 ntBASIC20.99■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms