Protein–RNA interactions for Protein: Q9HCC9

ZFYVE28, Lateral signaling target protein 2 homolog, humanhuman

Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE28Q9HCC9 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
ZFYVE28Q9HCC9 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
ZFYVE28Q9HCC9 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
ZFYVE28Q9HCC9 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
ZFYVE28Q9HCC9 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
ZFYVE28Q9HCC9 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC23.05■■□□□ 1.28
ZFYVE28Q9HCC9 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC23.05■■□□□ 1.28
ZFYVE28Q9HCC9 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC23.05■■□□□ 1.28
ZFYVE28Q9HCC9 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
ZFYVE28Q9HCC9 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
ZFYVE28Q9HCC9 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC23.05■■□□□ 1.28
ZFYVE28Q9HCC9 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC23.05■■□□□ 1.28
ZFYVE28Q9HCC9 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC23.05■■□□□ 1.28
ZFYVE28Q9HCC9 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC23.05■■□□□ 1.28
ZFYVE28Q9HCC9 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC23.05■■□□□ 1.28
ZFYVE28Q9HCC9 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
ZFYVE28Q9HCC9 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC23.05■■□□□ 1.28
ZFYVE28Q9HCC9 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
ZFYVE28Q9HCC9 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC23.05■■□□□ 1.28
ZFYVE28Q9HCC9 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
ZFYVE28Q9HCC9 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
ZFYVE28Q9HCC9 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
ZFYVE28Q9HCC9 STAC-204ENST00000457375 1366 ntTSL 2 BASIC23.04■■□□□ 1.28
ZFYVE28Q9HCC9 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC23.04■■□□□ 1.28
ZFYVE28Q9HCC9 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC23.04■■□□□ 1.28
ZFYVE28Q9HCC9 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
ZFYVE28Q9HCC9 MESTP1-201ENST00000404287 994 ntBASIC23.04■■□□□ 1.28
ZFYVE28Q9HCC9 AC063952.2-201ENST00000498792 1227 ntBASIC23.04■■□□□ 1.28
ZFYVE28Q9HCC9 NMU-205ENST00000511469 756 ntTSL 3 BASIC23.04■■□□□ 1.28
ZFYVE28Q9HCC9 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC23.04■■□□□ 1.28
ZFYVE28Q9HCC9 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC23.04■■□□□ 1.28
ZFYVE28Q9HCC9 METTL23-204ENST00000586752 904 ntTSL 2 BASIC23.04■■□□□ 1.28
ZFYVE28Q9HCC9 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC23.04■■□□□ 1.28
ZFYVE28Q9HCC9 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
ZFYVE28Q9HCC9 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
ZFYVE28Q9HCC9 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
ZFYVE28Q9HCC9 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
ZFYVE28Q9HCC9 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC23.03■■□□□ 1.28
ZFYVE28Q9HCC9 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
ZFYVE28Q9HCC9 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC23.03■■□□□ 1.28
ZFYVE28Q9HCC9 GOLGA2P6-201ENST00000340929 2049 ntBASIC23.03■■□□□ 1.28
ZFYVE28Q9HCC9 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
ZFYVE28Q9HCC9 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
ZFYVE28Q9HCC9 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC23.03■■□□□ 1.28
ZFYVE28Q9HCC9 PPP1R14BP5-201ENST00000440334 435 ntBASIC23.03■■□□□ 1.28
ZFYVE28Q9HCC9 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC23.03■■□□□ 1.28
ZFYVE28Q9HCC9 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
ZFYVE28Q9HCC9 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC23.03■■□□□ 1.28
ZFYVE28Q9HCC9 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
ZFYVE28Q9HCC9 AC026271.3-201ENST00000571884 352 ntBASIC23.03■■□□□ 1.28
ZFYVE28Q9HCC9 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC23.03■■□□□ 1.28
ZFYVE28Q9HCC9 DGCR10-201ENST00000609839 495 ntBASIC23.03■■□□□ 1.28
ZFYVE28Q9HCC9 MIR2861-201ENST00000636310 90 ntBASIC23.03■■□□□ 1.28
ZFYVE28Q9HCC9 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
ZFYVE28Q9HCC9 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC23.03■■□□□ 1.28
ZFYVE28Q9HCC9 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
ZFYVE28Q9HCC9 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
ZFYVE28Q9HCC9 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
ZFYVE28Q9HCC9 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC23.02■■□□□ 1.28
ZFYVE28Q9HCC9 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC23.02■■□□□ 1.28
ZFYVE28Q9HCC9 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
ZFYVE28Q9HCC9 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
ZFYVE28Q9HCC9 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC23.02■■□□□ 1.28
ZFYVE28Q9HCC9 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.28
ZFYVE28Q9HCC9 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC23.02■■□□□ 1.28
ZFYVE28Q9HCC9 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC23.02■■□□□ 1.28
ZFYVE28Q9HCC9 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC23.02■■□□□ 1.28
ZFYVE28Q9HCC9 MED25-212ENST00000618715 1467 ntTSL 5 BASIC23.02■■□□□ 1.28
ZFYVE28Q9HCC9 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
ZFYVE28Q9HCC9 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.27
ZFYVE28Q9HCC9 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC23.01■■□□□ 1.27
ZFYVE28Q9HCC9 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
ZFYVE28Q9HCC9 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
ZFYVE28Q9HCC9 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC23.01■■□□□ 1.27
ZFYVE28Q9HCC9 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC23.01■■□□□ 1.27
ZFYVE28Q9HCC9 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC23.01■■□□□ 1.27
ZFYVE28Q9HCC9 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
ZFYVE28Q9HCC9 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC23.01■■□□□ 1.27
ZFYVE28Q9HCC9 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
ZFYVE28Q9HCC9 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
ZFYVE28Q9HCC9 COPE-203ENST00000351079 907 ntTSL 2 BASIC23.01■■□□□ 1.27
ZFYVE28Q9HCC9 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
ZFYVE28Q9HCC9 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC23.01■■□□□ 1.27
ZFYVE28Q9HCC9 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC23.01■■□□□ 1.27
ZFYVE28Q9HCC9 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC23.01■■□□□ 1.27
ZFYVE28Q9HCC9 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
ZFYVE28Q9HCC9 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
ZFYVE28Q9HCC9 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC23.01■■□□□ 1.27
ZFYVE28Q9HCC9 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC23.01■■□□□ 1.27
ZFYVE28Q9HCC9 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
ZFYVE28Q9HCC9 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
ZFYVE28Q9HCC9 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC23■■□□□ 1.27
ZFYVE28Q9HCC9 PRR31-201ENST00000371629 978 ntTSL 2 BASIC23■■□□□ 1.27
ZFYVE28Q9HCC9 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
ZFYVE28Q9HCC9 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC23■■□□□ 1.27
ZFYVE28Q9HCC9 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC23■■□□□ 1.27
ZFYVE28Q9HCC9 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC23■■□□□ 1.27
ZFYVE28Q9HCC9 AL445675.2-201ENST00000620291 557 ntBASIC23■■□□□ 1.27
ZFYVE28Q9HCC9 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
ZFYVE28Q9HCC9 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC23■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms