Protein–RNA interactions for Protein: Q9H7L9

SUDS3, Sin3 histone deacetylase corepressor complex component SDS3, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3Q9H7L9 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SUDS3Q9H7L9 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC20.45■□□□□ 0.86
SUDS3Q9H7L9 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SUDS3Q9H7L9 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SUDS3Q9H7L9 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SUDS3Q9H7L9 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SUDS3Q9H7L9 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SUDS3Q9H7L9 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
SUDS3Q9H7L9 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
SUDS3Q9H7L9 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC20.44■□□□□ 0.86
SUDS3Q9H7L9 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SUDS3Q9H7L9 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SUDS3Q9H7L9 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SUDS3Q9H7L9 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
SUDS3Q9H7L9 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
SUDS3Q9H7L9 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SUDS3Q9H7L9 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SUDS3Q9H7L9 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
SUDS3Q9H7L9 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC20.44■□□□□ 0.86
SUDS3Q9H7L9 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
SUDS3Q9H7L9 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC20.44■□□□□ 0.86
SUDS3Q9H7L9 AL355472.2-201ENST00000422958 438 ntBASIC20.44■□□□□ 0.86
SUDS3Q9H7L9 PBX1-209ENST00000485769 834 ntTSL 2 BASIC20.44■□□□□ 0.86
SUDS3Q9H7L9 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC20.44■□□□□ 0.86
SUDS3Q9H7L9 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC20.44■□□□□ 0.86
SUDS3Q9H7L9 ISCU-212ENST00000547005 795 ntTSL 3 BASIC20.44■□□□□ 0.86
SUDS3Q9H7L9 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SUDS3Q9H7L9 MIR2861-201ENST00000636310 90 ntBASIC20.44■□□□□ 0.86
SUDS3Q9H7L9 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC20.44■□□□□ 0.86
SUDS3Q9H7L9 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
SUDS3Q9H7L9 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC20.44■□□□□ 0.86
SUDS3Q9H7L9 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
SUDS3Q9H7L9 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC20.44■□□□□ 0.86
SUDS3Q9H7L9 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SUDS3Q9H7L9 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC20.44■□□□□ 0.86
SUDS3Q9H7L9 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC20.44■□□□□ 0.86
SUDS3Q9H7L9 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
SUDS3Q9H7L9 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC20.44■□□□□ 0.86
SUDS3Q9H7L9 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
SUDS3Q9H7L9 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SUDS3Q9H7L9 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
SUDS3Q9H7L9 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC20.43■□□□□ 0.86
SUDS3Q9H7L9 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC20.43■□□□□ 0.86
SUDS3Q9H7L9 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
SUDS3Q9H7L9 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
SUDS3Q9H7L9 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
SUDS3Q9H7L9 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC20.43■□□□□ 0.86
SUDS3Q9H7L9 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC20.43■□□□□ 0.86
SUDS3Q9H7L9 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC20.43■□□□□ 0.86
SUDS3Q9H7L9 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC20.43■□□□□ 0.86
SUDS3Q9H7L9 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC20.43■□□□□ 0.86
SUDS3Q9H7L9 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
SUDS3Q9H7L9 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SUDS3Q9H7L9 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
SUDS3Q9H7L9 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC20.43■□□□□ 0.86
SUDS3Q9H7L9 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC20.42■□□□□ 0.86
SUDS3Q9H7L9 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
SUDS3Q9H7L9 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SUDS3Q9H7L9 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SUDS3Q9H7L9 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
SUDS3Q9H7L9 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SUDS3Q9H7L9 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC20.42■□□□□ 0.86
SUDS3Q9H7L9 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC20.42■□□□□ 0.86
SUDS3Q9H7L9 AC069152.1-201ENST00000438030 544 ntBASIC20.42■□□□□ 0.86
SUDS3Q9H7L9 CASP6-205ENST00000505486 538 ntTSL 4 BASIC20.42■□□□□ 0.86
SUDS3Q9H7L9 MARS-234ENST00000630571 216 ntTSL 5 BASIC20.42■□□□□ 0.86
SUDS3Q9H7L9 MARS-235ENST00000630803 183 ntTSL 3 BASIC20.42■□□□□ 0.86
SUDS3Q9H7L9 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
SUDS3Q9H7L9 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SUDS3Q9H7L9 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC20.42■□□□□ 0.86
SUDS3Q9H7L9 AC010980.2-201ENST00000587099 1412 ntBASIC20.42■□□□□ 0.86
SUDS3Q9H7L9 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC20.42■□□□□ 0.86
SUDS3Q9H7L9 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC20.42■□□□□ 0.86
SUDS3Q9H7L9 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SUDS3Q9H7L9 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SUDS3Q9H7L9 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SUDS3Q9H7L9 GABARAPL3-202ENST00000624044 1851 ntBASIC20.41■□□□□ 0.86
SUDS3Q9H7L9 AC020907.5-201ENST00000624372 1936 ntBASIC20.41■□□□□ 0.86
SUDS3Q9H7L9 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC20.41■□□□□ 0.86
SUDS3Q9H7L9 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SUDS3Q9H7L9 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
SUDS3Q9H7L9 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SUDS3Q9H7L9 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
SUDS3Q9H7L9 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SUDS3Q9H7L9 FAM21FP-204ENST00000608637 956 ntBASIC20.41■□□□□ 0.86
SUDS3Q9H7L9 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SUDS3Q9H7L9 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC20.41■□□□□ 0.86
SUDS3Q9H7L9 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC20.41■□□□□ 0.86
SUDS3Q9H7L9 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
SUDS3Q9H7L9 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
SUDS3Q9H7L9 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SUDS3Q9H7L9 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SUDS3Q9H7L9 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
SUDS3Q9H7L9 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SUDS3Q9H7L9 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SUDS3Q9H7L9 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SUDS3Q9H7L9 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SUDS3Q9H7L9 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SUDS3Q9H7L9 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SUDS3Q9H7L9 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms