Protein–RNA interactions for Protein: Q9H3M9

ATXN3L, Ataxin-3-like protein, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3LQ9H3M9 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
ATXN3LQ9H3M9 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
ATXN3LQ9H3M9 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
ATXN3LQ9H3M9 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
ATXN3LQ9H3M9 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
ATXN3LQ9H3M9 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
ATXN3LQ9H3M9 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
ATXN3LQ9H3M9 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
ATXN3LQ9H3M9 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ATXN3LQ9H3M9 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC21.1■□□□□ 0.97
ATXN3LQ9H3M9 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
ATXN3LQ9H3M9 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ATXN3LQ9H3M9 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
ATXN3LQ9H3M9 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
ATXN3LQ9H3M9 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC21.1■□□□□ 0.97
ATXN3LQ9H3M9 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
ATXN3LQ9H3M9 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC21.1■□□□□ 0.97
ATXN3LQ9H3M9 AC110285.5-201ENST00000611501 352 ntBASIC21.1■□□□□ 0.97
ATXN3LQ9H3M9 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
ATXN3LQ9H3M9 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ATXN3LQ9H3M9 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
ATXN3LQ9H3M9 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
ATXN3LQ9H3M9 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
ATXN3LQ9H3M9 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
ATXN3LQ9H3M9 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ATXN3LQ9H3M9 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
ATXN3LQ9H3M9 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
ATXN3LQ9H3M9 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ATXN3LQ9H3M9 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC21.09■□□□□ 0.97
ATXN3LQ9H3M9 HES2-206ENST00000489730 730 ntTSL 2 BASIC21.09■□□□□ 0.97
ATXN3LQ9H3M9 PRKY-204ENST00000533551 1019 ntBASIC21.09■□□□□ 0.97
ATXN3LQ9H3M9 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC21.09■□□□□ 0.97
ATXN3LQ9H3M9 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
ATXN3LQ9H3M9 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC21.09■□□□□ 0.97
ATXN3LQ9H3M9 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
ATXN3LQ9H3M9 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC21.09■□□□□ 0.97
ATXN3LQ9H3M9 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ATXN3LQ9H3M9 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
ATXN3LQ9H3M9 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
ATXN3LQ9H3M9 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC21.08■□□□□ 0.97
ATXN3LQ9H3M9 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC21.08■□□□□ 0.97
ATXN3LQ9H3M9 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
ATXN3LQ9H3M9 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
ATXN3LQ9H3M9 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
ATXN3LQ9H3M9 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
ATXN3LQ9H3M9 MDFI-202ENST00000373050 809 ntTSL 2 BASIC21.08■□□□□ 0.97
ATXN3LQ9H3M9 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
ATXN3LQ9H3M9 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
ATXN3LQ9H3M9 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC21.08■□□□□ 0.97
ATXN3LQ9H3M9 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC21.08■□□□□ 0.97
ATXN3LQ9H3M9 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC21.08■□□□□ 0.97
ATXN3LQ9H3M9 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC21.08■□□□□ 0.96
ATXN3LQ9H3M9 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC21.08■□□□□ 0.96
ATXN3LQ9H3M9 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
ATXN3LQ9H3M9 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.96
ATXN3LQ9H3M9 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
ATXN3LQ9H3M9 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ATXN3LQ9H3M9 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
ATXN3LQ9H3M9 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC21.07■□□□□ 0.96
ATXN3LQ9H3M9 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC21.07■□□□□ 0.96
ATXN3LQ9H3M9 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC21.07■□□□□ 0.96
ATXN3LQ9H3M9 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
ATXN3LQ9H3M9 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC21.07■□□□□ 0.96
ATXN3LQ9H3M9 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
ATXN3LQ9H3M9 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC21.07■□□□□ 0.96
ATXN3LQ9H3M9 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
ATXN3LQ9H3M9 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ATXN3LQ9H3M9 RPS2P55-201ENST00000397318 883 ntBASIC21.07■□□□□ 0.96
ATXN3LQ9H3M9 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC21.07■□□□□ 0.96
ATXN3LQ9H3M9 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
ATXN3LQ9H3M9 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC21.07■□□□□ 0.96
ATXN3LQ9H3M9 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC21.07■□□□□ 0.96
ATXN3LQ9H3M9 AC107956.1-201ENST00000494359 873 ntBASIC21.07■□□□□ 0.96
ATXN3LQ9H3M9 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
ATXN3LQ9H3M9 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC21.07■□□□□ 0.96
ATXN3LQ9H3M9 AC023632.3-201ENST00000521633 145 ntBASIC21.07■□□□□ 0.96
ATXN3LQ9H3M9 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC21.07■□□□□ 0.96
ATXN3LQ9H3M9 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
ATXN3LQ9H3M9 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC21.07■□□□□ 0.96
ATXN3LQ9H3M9 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
ATXN3LQ9H3M9 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC21.07■□□□□ 0.96
ATXN3LQ9H3M9 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ATXN3LQ9H3M9 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC21.07■□□□□ 0.96
ATXN3LQ9H3M9 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ATXN3LQ9H3M9 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ATXN3LQ9H3M9 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
ATXN3LQ9H3M9 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
ATXN3LQ9H3M9 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ATXN3LQ9H3M9 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC21.06■□□□□ 0.96
ATXN3LQ9H3M9 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ATXN3LQ9H3M9 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ATXN3LQ9H3M9 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ATXN3LQ9H3M9 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ATXN3LQ9H3M9 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ATXN3LQ9H3M9 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
ATXN3LQ9H3M9 AC012618.2-201ENST00000428058 849 ntBASIC21.06■□□□□ 0.96
ATXN3LQ9H3M9 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC21.06■□□□□ 0.96
ATXN3LQ9H3M9 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
ATXN3LQ9H3M9 AC233702.5-201ENST00000584107 538 ntBASIC21.06■□□□□ 0.96
ATXN3LQ9H3M9 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms