Protein–RNA interactions for Protein: Q9H3M0

KCNF1, Potassium voltage-gated channel subfamily F member 1, humanhuman

Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNF1Q9H3M0 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.1
KCNF1Q9H3M0 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
KCNF1Q9H3M0 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC21.89■■□□□ 1.1
KCNF1Q9H3M0 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
KCNF1Q9H3M0 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.1
KCNF1Q9H3M0 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC21.89■■□□□ 1.09
KCNF1Q9H3M0 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
KCNF1Q9H3M0 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
KCNF1Q9H3M0 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
KCNF1Q9H3M0 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
KCNF1Q9H3M0 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
KCNF1Q9H3M0 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC21.89■■□□□ 1.09
KCNF1Q9H3M0 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
KCNF1Q9H3M0 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
KCNF1Q9H3M0 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
KCNF1Q9H3M0 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
KCNF1Q9H3M0 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
KCNF1Q9H3M0 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
KCNF1Q9H3M0 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC21.89■■□□□ 1.09
KCNF1Q9H3M0 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
KCNF1Q9H3M0 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
KCNF1Q9H3M0 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
KCNF1Q9H3M0 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
KCNF1Q9H3M0 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC21.88■■□□□ 1.09
KCNF1Q9H3M0 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
KCNF1Q9H3M0 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
KCNF1Q9H3M0 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
KCNF1Q9H3M0 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC21.88■■□□□ 1.09
KCNF1Q9H3M0 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
KCNF1Q9H3M0 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
KCNF1Q9H3M0 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC21.88■■□□□ 1.09
KCNF1Q9H3M0 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
KCNF1Q9H3M0 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
KCNF1Q9H3M0 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
KCNF1Q9H3M0 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC21.88■■□□□ 1.09
KCNF1Q9H3M0 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
KCNF1Q9H3M0 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
KCNF1Q9H3M0 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC21.88■■□□□ 1.09
KCNF1Q9H3M0 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
KCNF1Q9H3M0 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC21.87■■□□□ 1.09
KCNF1Q9H3M0 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
KCNF1Q9H3M0 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
KCNF1Q9H3M0 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC21.87■■□□□ 1.09
KCNF1Q9H3M0 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC21.87■■□□□ 1.09
KCNF1Q9H3M0 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
KCNF1Q9H3M0 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
KCNF1Q9H3M0 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
KCNF1Q9H3M0 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
KCNF1Q9H3M0 AC116050.2-201ENST00000612102 1779 ntBASIC21.87■■□□□ 1.09
KCNF1Q9H3M0 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
KCNF1Q9H3M0 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
KCNF1Q9H3M0 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
KCNF1Q9H3M0 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
KCNF1Q9H3M0 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC21.86■■□□□ 1.09
KCNF1Q9H3M0 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
KCNF1Q9H3M0 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
KCNF1Q9H3M0 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC21.86■■□□□ 1.09
KCNF1Q9H3M0 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC21.86■■□□□ 1.09
KCNF1Q9H3M0 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
KCNF1Q9H3M0 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
KCNF1Q9H3M0 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC21.86■■□□□ 1.09
KCNF1Q9H3M0 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
KCNF1Q9H3M0 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
KCNF1Q9H3M0 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
KCNF1Q9H3M0 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
KCNF1Q9H3M0 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
KCNF1Q9H3M0 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC21.85■■□□□ 1.09
KCNF1Q9H3M0 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
KCNF1Q9H3M0 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC21.85■■□□□ 1.09
KCNF1Q9H3M0 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC21.85■■□□□ 1.09
KCNF1Q9H3M0 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
KCNF1Q9H3M0 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
KCNF1Q9H3M0 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
KCNF1Q9H3M0 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC21.85■■□□□ 1.09
KCNF1Q9H3M0 RARRES2P1-201ENST00000474487 481 ntBASIC21.85■■□□□ 1.09
KCNF1Q9H3M0 DUX4L19-201ENST00000557448 1267 ntBASIC21.85■■□□□ 1.09
KCNF1Q9H3M0 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
KCNF1Q9H3M0 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
KCNF1Q9H3M0 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC21.85■■□□□ 1.09
KCNF1Q9H3M0 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC21.85■■□□□ 1.09
KCNF1Q9H3M0 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC21.85■■□□□ 1.09
KCNF1Q9H3M0 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
KCNF1Q9H3M0 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
KCNF1Q9H3M0 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
KCNF1Q9H3M0 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC21.85■■□□□ 1.09
KCNF1Q9H3M0 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
KCNF1Q9H3M0 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
KCNF1Q9H3M0 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC21.84■■□□□ 1.09
KCNF1Q9H3M0 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
KCNF1Q9H3M0 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
KCNF1Q9H3M0 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC21.84■■□□□ 1.09
KCNF1Q9H3M0 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC21.84■■□□□ 1.09
KCNF1Q9H3M0 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
KCNF1Q9H3M0 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
KCNF1Q9H3M0 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC21.84■■□□□ 1.09
KCNF1Q9H3M0 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
KCNF1Q9H3M0 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
KCNF1Q9H3M0 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
KCNF1Q9H3M0 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC21.84■■□□□ 1.09
KCNF1Q9H3M0 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms