Protein–RNA interactions for Protein: Q9H2H9

SLC38A1, Sodium-coupled neutral amino acid transporter 1, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A1Q9H2H9 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SLC38A1Q9H2H9 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
SLC38A1Q9H2H9 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SLC38A1Q9H2H9 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC18.59■□□□□ 0.57
SLC38A1Q9H2H9 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
SLC38A1Q9H2H9 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
SLC38A1Q9H2H9 AC092437.1-201ENST00000624794 1048 ntBASIC18.59■□□□□ 0.57
SLC38A1Q9H2H9 AC008694.1-202ENST00000636953 945 ntBASIC18.59■□□□□ 0.57
SLC38A1Q9H2H9 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC18.59■□□□□ 0.57
SLC38A1Q9H2H9 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
SLC38A1Q9H2H9 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SLC38A1Q9H2H9 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
SLC38A1Q9H2H9 AC125437.2-201ENST00000625180 2167 ntBASIC18.59■□□□□ 0.57
SLC38A1Q9H2H9 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC18.59■□□□□ 0.57
SLC38A1Q9H2H9 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SLC38A1Q9H2H9 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SLC38A1Q9H2H9 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC18.59■□□□□ 0.57
SLC38A1Q9H2H9 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC18.59■□□□□ 0.57
SLC38A1Q9H2H9 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SLC38A1Q9H2H9 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SLC38A1Q9H2H9 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC18.59■□□□□ 0.57
SLC38A1Q9H2H9 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC18.59■□□□□ 0.57
SLC38A1Q9H2H9 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
SLC38A1Q9H2H9 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
SLC38A1Q9H2H9 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
SLC38A1Q9H2H9 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
SLC38A1Q9H2H9 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
SLC38A1Q9H2H9 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC18.58■□□□□ 0.57
SLC38A1Q9H2H9 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC18.58■□□□□ 0.57
SLC38A1Q9H2H9 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
SLC38A1Q9H2H9 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC18.58■□□□□ 0.57
SLC38A1Q9H2H9 METTL26-203ENST00000397664 604 ntTSL 2 BASIC18.58■□□□□ 0.56
SLC38A1Q9H2H9 AC004911.1-201ENST00000416316 871 ntBASIC18.58■□□□□ 0.56
SLC38A1Q9H2H9 AL355472.2-201ENST00000422958 438 ntBASIC18.58■□□□□ 0.56
SLC38A1Q9H2H9 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC18.58■□□□□ 0.56
SLC38A1Q9H2H9 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC18.58■□□□□ 0.56
SLC38A1Q9H2H9 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC18.58■□□□□ 0.56
SLC38A1Q9H2H9 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC18.58■□□□□ 0.56
SLC38A1Q9H2H9 OR10C1-204ENST00000622521 1039 ntBASIC18.58■□□□□ 0.56
SLC38A1Q9H2H9 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC18.58■□□□□ 0.56
SLC38A1Q9H2H9 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
SLC38A1Q9H2H9 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SLC38A1Q9H2H9 RNF165-205ENST00000588679 2904 ntBASIC18.58■□□□□ 0.56
SLC38A1Q9H2H9 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SLC38A1Q9H2H9 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC18.58■□□□□ 0.56
SLC38A1Q9H2H9 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC18.58■□□□□ 0.56
SLC38A1Q9H2H9 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SLC38A1Q9H2H9 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC18.57■□□□□ 0.56
SLC38A1Q9H2H9 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC18.57■□□□□ 0.56
SLC38A1Q9H2H9 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SLC38A1Q9H2H9 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC18.57■□□□□ 0.56
SLC38A1Q9H2H9 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC18.57■□□□□ 0.56
SLC38A1Q9H2H9 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SLC38A1Q9H2H9 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC18.57■□□□□ 0.56
SLC38A1Q9H2H9 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
SLC38A1Q9H2H9 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
SLC38A1Q9H2H9 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
SLC38A1Q9H2H9 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SLC38A1Q9H2H9 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SLC38A1Q9H2H9 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC18.57■□□□□ 0.56
SLC38A1Q9H2H9 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC18.57■□□□□ 0.56
SLC38A1Q9H2H9 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC18.57■□□□□ 0.56
SLC38A1Q9H2H9 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SLC38A1Q9H2H9 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SLC38A1Q9H2H9 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC18.57■□□□□ 0.56
SLC38A1Q9H2H9 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC18.57■□□□□ 0.56
SLC38A1Q9H2H9 AC010980.2-201ENST00000587099 1412 ntBASIC18.57■□□□□ 0.56
SLC38A1Q9H2H9 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SLC38A1Q9H2H9 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC18.56■□□□□ 0.56
SLC38A1Q9H2H9 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
SLC38A1Q9H2H9 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SLC38A1Q9H2H9 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
SLC38A1Q9H2H9 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
SLC38A1Q9H2H9 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SLC38A1Q9H2H9 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SLC38A1Q9H2H9 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
SLC38A1Q9H2H9 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SLC38A1Q9H2H9 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SLC38A1Q9H2H9 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC18.56■□□□□ 0.56
SLC38A1Q9H2H9 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC18.56■□□□□ 0.56
SLC38A1Q9H2H9 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
SLC38A1Q9H2H9 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SLC38A1Q9H2H9 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
SLC38A1Q9H2H9 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
SLC38A1Q9H2H9 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
SLC38A1Q9H2H9 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SLC38A1Q9H2H9 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SLC38A1Q9H2H9 TMEM179-206ENST00000616017 1645 ntBASIC18.56■□□□□ 0.56
SLC38A1Q9H2H9 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SLC38A1Q9H2H9 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SLC38A1Q9H2H9 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SLC38A1Q9H2H9 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SLC38A1Q9H2H9 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SLC38A1Q9H2H9 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
SLC38A1Q9H2H9 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SLC38A1Q9H2H9 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SLC38A1Q9H2H9 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SLC38A1Q9H2H9 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SLC38A1Q9H2H9 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SLC38A1Q9H2H9 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms