Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC20.15■□□□□ 0.82
VPS11Q9H270 DPP3P2-201ENST00000416030 1696 ntBASIC20.15■□□□□ 0.82
VPS11Q9H270 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
VPS11Q9H270 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
VPS11Q9H270 H19-201ENST00000411754 1788 ntTSL 5 BASIC20.15■□□□□ 0.82
VPS11Q9H270 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
VPS11Q9H270 TNXA-203ENST00000507684 2038 ntBASIC20.15■□□□□ 0.82
VPS11Q9H270 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC20.15■□□□□ 0.82
VPS11Q9H270 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
VPS11Q9H270 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
VPS11Q9H270 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
VPS11Q9H270 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
VPS11Q9H270 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
VPS11Q9H270 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC20.14■□□□□ 0.81
VPS11Q9H270 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC20.14■□□□□ 0.81
VPS11Q9H270 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC20.14■□□□□ 0.81
VPS11Q9H270 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
VPS11Q9H270 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
VPS11Q9H270 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
VPS11Q9H270 RBM17P2-201ENST00000616397 1405 ntBASIC20.14■□□□□ 0.81
VPS11Q9H270 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
VPS11Q9H270 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC20.14■□□□□ 0.81
VPS11Q9H270 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
VPS11Q9H270 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
VPS11Q9H270 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
VPS11Q9H270 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
VPS11Q9H270 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
VPS11Q9H270 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
VPS11Q9H270 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC20.13■□□□□ 0.81
VPS11Q9H270 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
VPS11Q9H270 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
VPS11Q9H270 KRT8P36-201ENST00000489121 1440 ntBASIC20.13■□□□□ 0.81
VPS11Q9H270 AC004854.2-201ENST00000608450 1441 ntBASIC20.13■□□□□ 0.81
VPS11Q9H270 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
VPS11Q9H270 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
VPS11Q9H270 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
VPS11Q9H270 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
VPS11Q9H270 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC20.13■□□□□ 0.81
VPS11Q9H270 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
VPS11Q9H270 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
VPS11Q9H270 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
VPS11Q9H270 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
VPS11Q9H270 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC20.13■□□□□ 0.81
VPS11Q9H270 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC20.13■□□□□ 0.81
VPS11Q9H270 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC20.13■□□□□ 0.81
VPS11Q9H270 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
VPS11Q9H270 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
VPS11Q9H270 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
VPS11Q9H270 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
VPS11Q9H270 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC20.13■□□□□ 0.81
VPS11Q9H270 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
VPS11Q9H270 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
VPS11Q9H270 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
VPS11Q9H270 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC20.13■□□□□ 0.81
VPS11Q9H270 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC20.12■□□□□ 0.81
VPS11Q9H270 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC20.12■□□□□ 0.81
VPS11Q9H270 POLI-202ENST00000406285 2030 ntTSL 2 BASIC20.12■□□□□ 0.81
VPS11Q9H270 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
VPS11Q9H270 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
VPS11Q9H270 YBX1P1-201ENST00000445822 960 ntBASIC20.12■□□□□ 0.81
VPS11Q9H270 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
VPS11Q9H270 AC243732.1-201ENST00000612648 864 ntBASIC20.12■□□□□ 0.81
VPS11Q9H270 SP2-202ENST00000613139 908 ntTSL 5 BASIC20.12■□□□□ 0.81
VPS11Q9H270 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
VPS11Q9H270 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC20.12■□□□□ 0.81
VPS11Q9H270 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
VPS11Q9H270 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
VPS11Q9H270 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
VPS11Q9H270 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC20.12■□□□□ 0.81
VPS11Q9H270 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
VPS11Q9H270 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC20.12■□□□□ 0.81
VPS11Q9H270 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC20.12■□□□□ 0.81
VPS11Q9H270 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC20.11■□□□□ 0.81
VPS11Q9H270 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC20.11■□□□□ 0.81
VPS11Q9H270 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
VPS11Q9H270 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
VPS11Q9H270 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
VPS11Q9H270 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC20.11■□□□□ 0.81
VPS11Q9H270 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
VPS11Q9H270 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
VPS11Q9H270 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
VPS11Q9H270 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
VPS11Q9H270 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
VPS11Q9H270 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
VPS11Q9H270 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
VPS11Q9H270 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC20.11■□□□□ 0.81
VPS11Q9H270 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC20.11■□□□□ 0.81
VPS11Q9H270 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC20.11■□□□□ 0.81
VPS11Q9H270 KRT18P14-201ENST00000534205 1250 ntBASIC20.11■□□□□ 0.81
VPS11Q9H270 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
VPS11Q9H270 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
VPS11Q9H270 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
VPS11Q9H270 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
VPS11Q9H270 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
VPS11Q9H270 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC20.11■□□□□ 0.81
VPS11Q9H270 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC20.11■□□□□ 0.81
VPS11Q9H270 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC20.11■□□□□ 0.81
VPS11Q9H270 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
VPS11Q9H270 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC20.1■□□□□ 0.81
VPS11Q9H270 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms