Protein–RNA interactions for Protein: Q9C0D0

PHACTR1, Phosphatase and actin regulator 1, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR1Q9C0D0 CASP6-205ENST00000505486 538 ntTSL 4 BASIC20.34■□□□□ 0.85
PHACTR1Q9C0D0 KRT18P14-201ENST00000534205 1250 ntBASIC20.34■□□□□ 0.85
PHACTR1Q9C0D0 AL162412.1-201ENST00000567129 965 ntBASIC20.34■□□□□ 0.85
PHACTR1Q9C0D0 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
PHACTR1Q9C0D0 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PHACTR1Q9C0D0 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC20.34■□□□□ 0.85
PHACTR1Q9C0D0 AL020996.1-203ENST00000536896 2307 ntBASIC20.34■□□□□ 0.85
PHACTR1Q9C0D0 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC20.34■□□□□ 0.85
PHACTR1Q9C0D0 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PHACTR1Q9C0D0 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
PHACTR1Q9C0D0 STK25-204ENST00000405585 1643 ntTSL 2 BASIC20.34■□□□□ 0.85
PHACTR1Q9C0D0 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PHACTR1Q9C0D0 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PHACTR1Q9C0D0 AC093484.2-201ENST00000580996 2166 ntBASIC20.34■□□□□ 0.85
PHACTR1Q9C0D0 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PHACTR1Q9C0D0 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC20.33■□□□□ 0.85
PHACTR1Q9C0D0 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PHACTR1Q9C0D0 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC20.33■□□□□ 0.85
PHACTR1Q9C0D0 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PHACTR1Q9C0D0 CYP21A1P-202ENST00000354927 1481 ntBASIC20.33■□□□□ 0.85
PHACTR1Q9C0D0 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PHACTR1Q9C0D0 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20.33■□□□□ 0.85
PHACTR1Q9C0D0 JTB-203ENST00000368589 1216 ntTSL 2 BASIC20.33■□□□□ 0.85
PHACTR1Q9C0D0 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC20.33■□□□□ 0.85
PHACTR1Q9C0D0 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC20.33■□□□□ 0.85
PHACTR1Q9C0D0 RAB43-208ENST00000615093 783 ntTSL 5 BASIC20.33■□□□□ 0.85
PHACTR1Q9C0D0 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC20.33■□□□□ 0.85
PHACTR1Q9C0D0 PTBP1P-201ENST00000554374 1601 ntBASIC20.33■□□□□ 0.84
PHACTR1Q9C0D0 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
PHACTR1Q9C0D0 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC20.33■□□□□ 0.84
PHACTR1Q9C0D0 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
PHACTR1Q9C0D0 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
PHACTR1Q9C0D0 AC087289.5-201ENST00000586076 3175 ntBASIC20.32■□□□□ 0.84
PHACTR1Q9C0D0 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PHACTR1Q9C0D0 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PHACTR1Q9C0D0 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
PHACTR1Q9C0D0 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PHACTR1Q9C0D0 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
PHACTR1Q9C0D0 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PHACTR1Q9C0D0 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PHACTR1Q9C0D0 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC20.32■□□□□ 0.84
PHACTR1Q9C0D0 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC20.32■□□□□ 0.84
PHACTR1Q9C0D0 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC20.32■□□□□ 0.84
PHACTR1Q9C0D0 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC20.32■□□□□ 0.84
PHACTR1Q9C0D0 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
PHACTR1Q9C0D0 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
PHACTR1Q9C0D0 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PHACTR1Q9C0D0 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PHACTR1Q9C0D0 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PHACTR1Q9C0D0 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC20.32■□□□□ 0.84
PHACTR1Q9C0D0 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC20.32■□□□□ 0.84
PHACTR1Q9C0D0 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
PHACTR1Q9C0D0 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
PHACTR1Q9C0D0 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
PHACTR1Q9C0D0 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
PHACTR1Q9C0D0 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
PHACTR1Q9C0D0 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC20.31■□□□□ 0.84
PHACTR1Q9C0D0 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC20.31■□□□□ 0.84
PHACTR1Q9C0D0 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PHACTR1Q9C0D0 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PHACTR1Q9C0D0 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PHACTR1Q9C0D0 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC20.31■□□□□ 0.84
PHACTR1Q9C0D0 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC20.31■□□□□ 0.84
PHACTR1Q9C0D0 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC20.31■□□□□ 0.84
PHACTR1Q9C0D0 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC20.31■□□□□ 0.84
PHACTR1Q9C0D0 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PHACTR1Q9C0D0 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PHACTR1Q9C0D0 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC20.31■□□□□ 0.84
PHACTR1Q9C0D0 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PHACTR1Q9C0D0 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC20.3■□□□□ 0.84
PHACTR1Q9C0D0 Z82202.1-201ENST00000623446 1880 ntBASIC20.3■□□□□ 0.84
PHACTR1Q9C0D0 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC20.3■□□□□ 0.84
PHACTR1Q9C0D0 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC20.3■□□□□ 0.84
PHACTR1Q9C0D0 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC20.3■□□□□ 0.84
PHACTR1Q9C0D0 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
PHACTR1Q9C0D0 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PHACTR1Q9C0D0 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PHACTR1Q9C0D0 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PHACTR1Q9C0D0 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PHACTR1Q9C0D0 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
PHACTR1Q9C0D0 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PHACTR1Q9C0D0 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PHACTR1Q9C0D0 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
PHACTR1Q9C0D0 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC20.3■□□□□ 0.84
PHACTR1Q9C0D0 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC20.3■□□□□ 0.84
PHACTR1Q9C0D0 MYCNOS-205ENST00000641950 531 ntBASIC20.3■□□□□ 0.84
PHACTR1Q9C0D0 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
PHACTR1Q9C0D0 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PHACTR1Q9C0D0 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PHACTR1Q9C0D0 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC20.3■□□□□ 0.84
PHACTR1Q9C0D0 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
PHACTR1Q9C0D0 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PHACTR1Q9C0D0 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
PHACTR1Q9C0D0 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
PHACTR1Q9C0D0 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC20.29■□□□□ 0.84
PHACTR1Q9C0D0 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC20.29■□□□□ 0.84
PHACTR1Q9C0D0 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
PHACTR1Q9C0D0 AC098818.2-201ENST00000564925 2320 ntBASIC20.29■□□□□ 0.84
PHACTR1Q9C0D0 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PHACTR1Q9C0D0 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms