Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
KRTAP3-3Q9BYR6 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
KRTAP3-3Q9BYR6 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC12.37□□□□□ -0.43
KRTAP3-3Q9BYR6 AL136116.2-201ENST00000404020 785 ntBASIC12.37□□□□□ -0.43
KRTAP3-3Q9BYR6 RPS3AP24-201ENST00000407896 734 ntBASIC12.37□□□□□ -0.43
KRTAP3-3Q9BYR6 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
KRTAP3-3Q9BYR6 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
KRTAP3-3Q9BYR6 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC12.37□□□□□ -0.43
KRTAP3-3Q9BYR6 NANOGNBP1-201ENST00000448444 480 ntBASIC12.37□□□□□ -0.43
KRTAP3-3Q9BYR6 Z99943.1-201ENST00000451545 718 ntTSL 3 BASIC12.37□□□□□ -0.43
KRTAP3-3Q9BYR6 AC132008.2-201ENST00000453454 956 ntTSL 4 BASIC12.37□□□□□ -0.43
KRTAP3-3Q9BYR6 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC12.37□□□□□ -0.43
KRTAP3-3Q9BYR6 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
KRTAP3-3Q9BYR6 NUDT19P5-201ENST00000505620 569 ntBASIC12.37□□□□□ -0.43
KRTAP3-3Q9BYR6 AC113398.2-201ENST00000507630 558 ntBASIC12.37□□□□□ -0.43
KRTAP3-3Q9BYR6 NBPF22P-201ENST00000508988 1143 ntBASIC12.37□□□□□ -0.43
KRTAP3-3Q9BYR6 AC111000.1-201ENST00000514545 713 ntBASIC12.37□□□□□ -0.43
KRTAP3-3Q9BYR6 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
KRTAP3-3Q9BYR6 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC12.37□□□□□ -0.43
KRTAP3-3Q9BYR6 C14orf2-208ENST00000554713 1058 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
KRTAP3-3Q9BYR6 SERPINE4P-201ENST00000554978 281 ntBASIC12.37□□□□□ -0.43
KRTAP3-3Q9BYR6 C14orf2-210ENST00000555030 749 ntTSL 3 BASIC12.37□□□□□ -0.43
KRTAP3-3Q9BYR6 AC013652.1-206ENST00000558277 789 ntTSL 2 BASIC12.37□□□□□ -0.43
KRTAP3-3Q9BYR6 BEAN1-AS1-203ENST00000569125 530 ntTSL 4 BASIC12.37□□□□□ -0.43
KRTAP3-3Q9BYR6 CAPN3-219ENST00000569136 1029 ntTSL 2 BASIC12.37□□□□□ -0.43
KRTAP3-3Q9BYR6 AP003465.2-201ENST00000602571 373 ntBASIC12.37□□□□□ -0.43
KRTAP3-3Q9BYR6 CCL4L2-210ENST00000610565 785 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
KRTAP3-3Q9BYR6 CCL4L2-211ENST00000613173 741 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
KRTAP3-3Q9BYR6 CCL4L2-212ENST00000615418 954 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
KRTAP3-3Q9BYR6 CCL4L2-213ENST00000617405 846 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
KRTAP3-3Q9BYR6 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
KRTAP3-3Q9BYR6 AC009152.1-201ENST00000618290 556 ntBASIC12.37□□□□□ -0.43
KRTAP3-3Q9BYR6 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
KRTAP3-3Q9BYR6 CCL4L2-216ENST00000620098 836 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
KRTAP3-3Q9BYR6 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
KRTAP3-3Q9BYR6 CCL4L2-218ENST00000620576 652 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
KRTAP3-3Q9BYR6 CCL4L2-219ENST00000620732 856 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
KRTAP3-3Q9BYR6 AL356118.1-201ENST00000635272 1078 ntBASIC12.37□□□□□ -0.43
KRTAP3-3Q9BYR6 MEST-211ENST00000437945 1455 ntTSL 5 BASIC12.37□□□□□ -0.43
KRTAP3-3Q9BYR6 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC12.37□□□□□ -0.43
KRTAP3-3Q9BYR6 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC12.37□□□□□ -0.43
KRTAP3-3Q9BYR6 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
KRTAP3-3Q9BYR6 AC135983.2-203ENST00000454486 1613 ntBASIC12.37□□□□□ -0.43
KRTAP3-3Q9BYR6 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
KRTAP3-3Q9BYR6 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
KRTAP3-3Q9BYR6 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC12.36□□□□□ -0.43
KRTAP3-3Q9BYR6 RNU4-24P-201ENST00000364565 139 ntBASIC12.36□□□□□ -0.43
KRTAP3-3Q9BYR6 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
KRTAP3-3Q9BYR6 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC12.36□□□□□ -0.43
KRTAP3-3Q9BYR6 TFAMP1-201ENST00000412727 736 ntBASIC12.36□□□□□ -0.43
KRTAP3-3Q9BYR6 AC018814.1-201ENST00000418972 357 ntTSL 3 BASIC12.36□□□□□ -0.43
KRTAP3-3Q9BYR6 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC12.36□□□□□ -0.43
KRTAP3-3Q9BYR6 AC004837.1-201ENST00000446267 564 ntBASIC12.36□□□□□ -0.43
KRTAP3-3Q9BYR6 AC012462.1-201ENST00000447835 825 ntTSL 5 BASIC12.36□□□□□ -0.43
KRTAP3-3Q9BYR6 AC026117.1-201ENST00000509658 883 ntBASIC12.36□□□□□ -0.43
KRTAP3-3Q9BYR6 AP3M2-205ENST00000517922 1094 ntTSL 2 BASIC12.36□□□□□ -0.43
KRTAP3-3Q9BYR6 RFPL1S-203ENST00000539579 330 ntBASIC12.36□□□□□ -0.43
KRTAP3-3Q9BYR6 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC12.36□□□□□ -0.43
KRTAP3-3Q9BYR6 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
KRTAP3-3Q9BYR6 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC12.36□□□□□ -0.43
KRTAP3-3Q9BYR6 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC12.36□□□□□ -0.43
KRTAP3-3Q9BYR6 AC010546.1-201ENST00000569391 485 ntBASIC12.36□□□□□ -0.43
KRTAP3-3Q9BYR6 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC12.36□□□□□ -0.43
KRTAP3-3Q9BYR6 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC12.36□□□□□ -0.43
KRTAP3-3Q9BYR6 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC12.36□□□□□ -0.43
KRTAP3-3Q9BYR6 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC12.36□□□□□ -0.43
KRTAP3-3Q9BYR6 AC012358.3-204ENST00000599475 978 ntTSL 3 BASIC12.36□□□□□ -0.43
KRTAP3-3Q9BYR6 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC12.36□□□□□ -0.43
KRTAP3-3Q9BYR6 AL022067.1-201ENST00000602426 454 ntBASIC12.36□□□□□ -0.43
KRTAP3-3Q9BYR6 AC004987.4-201ENST00000603383 338 ntBASIC12.36□□□□□ -0.43
KRTAP3-3Q9BYR6 AC027271.1-201ENST00000610270 610 ntBASIC12.36□□□□□ -0.43
KRTAP3-3Q9BYR6 AC090164.2-201ENST00000611487 516 ntBASIC12.36□□□□□ -0.43
KRTAP3-3Q9BYR6 AC009318.3-201ENST00000616916 503 ntBASIC12.36□□□□□ -0.43
KRTAP3-3Q9BYR6 AL357153.4-201ENST00000620487 1016 ntBASIC12.36□□□□□ -0.43
KRTAP3-3Q9BYR6 AC126544.2-201ENST00000625174 749 ntBASIC12.36□□□□□ -0.43
KRTAP3-3Q9BYR6 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
KRTAP3-3Q9BYR6 AC239799.2-201ENST00000622359 2002 ntBASIC12.35□□□□□ -0.43
KRTAP3-3Q9BYR6 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
KRTAP3-3Q9BYR6 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC12.35□□□□□ -0.43
KRTAP3-3Q9BYR6 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
KRTAP3-3Q9BYR6 AC020907.1-201ENST00000616460 1350 ntBASIC12.35□□□□□ -0.43
KRTAP3-3Q9BYR6 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
KRTAP3-3Q9BYR6 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
KRTAP3-3Q9BYR6 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC12.35□□□□□ -0.43
KRTAP3-3Q9BYR6 SUMO1-206ENST00000409368 1187 ntTSL 4 BASIC12.35□□□□□ -0.43
KRTAP3-3Q9BYR6 MTCO2P8-201ENST00000412213 658 ntBASIC12.35□□□□□ -0.43
KRTAP3-3Q9BYR6 NPM1P25-201ENST00000429734 854 ntBASIC12.35□□□□□ -0.43
KRTAP3-3Q9BYR6 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC12.35□□□□□ -0.43
KRTAP3-3Q9BYR6 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC12.35□□□□□ -0.43
KRTAP3-3Q9BYR6 AC005297.1-201ENST00000444765 862 ntBASIC12.35□□□□□ -0.43
KRTAP3-3Q9BYR6 CCRL1P1-201ENST00000449542 1053 ntBASIC12.35□□□□□ -0.43
KRTAP3-3Q9BYR6 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC12.35□□□□□ -0.43
KRTAP3-3Q9BYR6 LINC02499-203ENST00000508147 455 ntTSL 3 BASIC12.35□□□□□ -0.43
KRTAP3-3Q9BYR6 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC12.35□□□□□ -0.43
KRTAP3-3Q9BYR6 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC12.35□□□□□ -0.43
KRTAP3-3Q9BYR6 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC12.35□□□□□ -0.43
KRTAP3-3Q9BYR6 RNU6-1178P-201ENST00000516674 107 ntBASIC12.35□□□□□ -0.43
KRTAP3-3Q9BYR6 KHDRBS3-206ENST00000520981 1243 ntTSL 5 BASIC12.35□□□□□ -0.43
KRTAP3-3Q9BYR6 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
KRTAP3-3Q9BYR6 AP001636.1-201ENST00000531997 1122 ntBASIC12.35□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms