Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC6.84□□□□□ -1.31
KRTAP4-3Q9BYR4 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC6.84□□□□□ -1.31
KRTAP4-3Q9BYR4 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
KRTAP4-3Q9BYR4 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC6.84□□□□□ -1.31
KRTAP4-3Q9BYR4 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC6.84□□□□□ -1.31
KRTAP4-3Q9BYR4 BRWD1-AS2-201ENST00000603064 1028 ntBASIC6.84□□□□□ -1.31
KRTAP4-3Q9BYR4 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC6.84□□□□□ -1.31
KRTAP4-3Q9BYR4 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
KRTAP4-3Q9BYR4 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
KRTAP4-3Q9BYR4 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC6.84□□□□□ -1.31
KRTAP4-3Q9BYR4 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC6.84□□□□□ -1.31
KRTAP4-3Q9BYR4 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
KRTAP4-3Q9BYR4 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
KRTAP4-3Q9BYR4 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
KRTAP4-3Q9BYR4 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
KRTAP4-3Q9BYR4 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
KRTAP4-3Q9BYR4 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC6.84□□□□□ -1.31
KRTAP4-3Q9BYR4 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC6.84□□□□□ -1.32
KRTAP4-3Q9BYR4 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.32
KRTAP4-3Q9BYR4 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.32
KRTAP4-3Q9BYR4 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC6.84□□□□□ -1.32
KRTAP4-3Q9BYR4 DPP3P2-201ENST00000416030 1696 ntBASIC6.84□□□□□ -1.32
KRTAP4-3Q9BYR4 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC6.84□□□□□ -1.32
KRTAP4-3Q9BYR4 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.32
KRTAP4-3Q9BYR4 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.32
KRTAP4-3Q9BYR4 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC6.84□□□□□ -1.32
KRTAP4-3Q9BYR4 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
KRTAP4-3Q9BYR4 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC6.83□□□□□ -1.32
KRTAP4-3Q9BYR4 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
KRTAP4-3Q9BYR4 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC6.83□□□□□ -1.32
KRTAP4-3Q9BYR4 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
KRTAP4-3Q9BYR4 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
KRTAP4-3Q9BYR4 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC6.83□□□□□ -1.32
KRTAP4-3Q9BYR4 AC007225.1-201ENST00000566331 1836 ntBASIC6.83□□□□□ -1.32
KRTAP4-3Q9BYR4 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC6.83□□□□□ -1.32
KRTAP4-3Q9BYR4 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC6.83□□□□□ -1.32
KRTAP4-3Q9BYR4 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC6.83□□□□□ -1.32
KRTAP4-3Q9BYR4 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
KRTAP4-3Q9BYR4 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
KRTAP4-3Q9BYR4 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
KRTAP4-3Q9BYR4 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC6.83□□□□□ -1.32
KRTAP4-3Q9BYR4 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC6.83□□□□□ -1.32
KRTAP4-3Q9BYR4 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC6.83□□□□□ -1.32
KRTAP4-3Q9BYR4 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC6.83□□□□□ -1.32
KRTAP4-3Q9BYR4 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC6.83□□□□□ -1.32
KRTAP4-3Q9BYR4 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
KRTAP4-3Q9BYR4 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC6.83□□□□□ -1.32
KRTAP4-3Q9BYR4 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
KRTAP4-3Q9BYR4 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
KRTAP4-3Q9BYR4 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC6.83□□□□□ -1.32
KRTAP4-3Q9BYR4 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
KRTAP4-3Q9BYR4 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC6.83□□□□□ -1.32
KRTAP4-3Q9BYR4 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC6.83□□□□□ -1.32
KRTAP4-3Q9BYR4 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC6.83□□□□□ -1.32
KRTAP4-3Q9BYR4 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC6.83□□□□□ -1.32
KRTAP4-3Q9BYR4 F2R-202ENST00000505600 442 ntTSL 2 BASIC6.83□□□□□ -1.32
KRTAP4-3Q9BYR4 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC6.83□□□□□ -1.32
KRTAP4-3Q9BYR4 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC6.83□□□□□ -1.32
KRTAP4-3Q9BYR4 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC6.83□□□□□ -1.32
KRTAP4-3Q9BYR4 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
KRTAP4-3Q9BYR4 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC6.83□□□□□ -1.32
KRTAP4-3Q9BYR4 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
KRTAP4-3Q9BYR4 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC6.83□□□□□ -1.32
KRTAP4-3Q9BYR4 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC6.83□□□□□ -1.32
KRTAP4-3Q9BYR4 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC6.83□□□□□ -1.32
KRTAP4-3Q9BYR4 AP006294.2-201ENST00000641667 209 ntBASIC6.83□□□□□ -1.32
KRTAP4-3Q9BYR4 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
KRTAP4-3Q9BYR4 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
KRTAP4-3Q9BYR4 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
KRTAP4-3Q9BYR4 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC6.83□□□□□ -1.32
KRTAP4-3Q9BYR4 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
KRTAP4-3Q9BYR4 ME2-216ENST00000639850 2331 ntTSL 5 BASIC6.83□□□□□ -1.32
KRTAP4-3Q9BYR4 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC6.83□□□□□ -1.32
KRTAP4-3Q9BYR4 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
KRTAP4-3Q9BYR4 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC6.83□□□□□ -1.32
KRTAP4-3Q9BYR4 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
KRTAP4-3Q9BYR4 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC6.83□□□□□ -1.32
KRTAP4-3Q9BYR4 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
KRTAP4-3Q9BYR4 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC6.83□□□□□ -1.32
KRTAP4-3Q9BYR4 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
KRTAP4-3Q9BYR4 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
KRTAP4-3Q9BYR4 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
KRTAP4-3Q9BYR4 AC073314.1-201ENST00000568729 2216 ntBASIC6.82□□□□□ -1.32
KRTAP4-3Q9BYR4 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
KRTAP4-3Q9BYR4 AC112907.3-201ENST00000577781 2400 ntBASIC6.82□□□□□ -1.32
KRTAP4-3Q9BYR4 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC6.82□□□□□ -1.32
KRTAP4-3Q9BYR4 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC6.82□□□□□ -1.32
KRTAP4-3Q9BYR4 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
KRTAP4-3Q9BYR4 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
KRTAP4-3Q9BYR4 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
KRTAP4-3Q9BYR4 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
KRTAP4-3Q9BYR4 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
KRTAP4-3Q9BYR4 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
KRTAP4-3Q9BYR4 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC6.82□□□□□ -1.32
KRTAP4-3Q9BYR4 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
KRTAP4-3Q9BYR4 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC6.82□□□□□ -1.32
KRTAP4-3Q9BYR4 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
KRTAP4-3Q9BYR4 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
KRTAP4-3Q9BYR4 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC6.82□□□□□ -1.32
KRTAP4-3Q9BYR4 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms