Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC21.11■□□□□ 0.97
SMOQ99835 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
SMOQ99835 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC21.11■□□□□ 0.97
SMOQ99835 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC21.11■□□□□ 0.97
SMOQ99835 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SMOQ99835 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SMOQ99835 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SMOQ99835 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SMOQ99835 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC21.1■□□□□ 0.97
SMOQ99835 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SMOQ99835 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC21.1■□□□□ 0.97
SMOQ99835 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
SMOQ99835 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SMOQ99835 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
SMOQ99835 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC21.1■□□□□ 0.97
SMOQ99835 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SMOQ99835 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SMOQ99835 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC21.1■□□□□ 0.97
SMOQ99835 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
SMOQ99835 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SMOQ99835 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC21.1■□□□□ 0.97
SMOQ99835 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC21.1■□□□□ 0.97
SMOQ99835 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC21.1■□□□□ 0.97
SMOQ99835 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SMOQ99835 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SMOQ99835 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SMOQ99835 AC092667.1-201ENST00000434301 2586 ntBASIC21.1■□□□□ 0.97
SMOQ99835 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
SMOQ99835 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SMOQ99835 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC21.1■□□□□ 0.97
SMOQ99835 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC21.09■□□□□ 0.97
SMOQ99835 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC21.09■□□□□ 0.97
SMOQ99835 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SMOQ99835 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC21.09■□□□□ 0.97
SMOQ99835 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SMOQ99835 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC21.09■□□□□ 0.97
SMOQ99835 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
SMOQ99835 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SMOQ99835 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC21.09■□□□□ 0.97
SMOQ99835 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SMOQ99835 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SMOQ99835 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC21.09■□□□□ 0.97
SMOQ99835 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
SMOQ99835 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SMOQ99835 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
SMOQ99835 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SMOQ99835 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SMOQ99835 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
SMOQ99835 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
SMOQ99835 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC21.08■□□□□ 0.97
SMOQ99835 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
SMOQ99835 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
SMOQ99835 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
SMOQ99835 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SMOQ99835 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
SMOQ99835 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
SMOQ99835 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
SMOQ99835 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
SMOQ99835 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC21.08■□□□□ 0.97
SMOQ99835 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC21.08■□□□□ 0.97
SMOQ99835 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC21.08■□□□□ 0.97
SMOQ99835 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC21.08■□□□□ 0.97
SMOQ99835 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
SMOQ99835 AL512408.1-201ENST00000569378 2000 ntBASIC21.08■□□□□ 0.97
SMOQ99835 RN7SL471P-201ENST00000580476 299 ntBASIC21.08■□□□□ 0.97
SMOQ99835 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC21.08■□□□□ 0.97
SMOQ99835 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC21.08■□□□□ 0.96
SMOQ99835 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
SMOQ99835 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC21.07■□□□□ 0.96
SMOQ99835 AL157384.1-201ENST00000445995 2473 ntBASIC21.07■□□□□ 0.96
SMOQ99835 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC21.07■□□□□ 0.96
SMOQ99835 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SMOQ99835 GABARAPL3-202ENST00000624044 1851 ntBASIC21.07■□□□□ 0.96
SMOQ99835 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SMOQ99835 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC21.07■□□□□ 0.96
SMOQ99835 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SMOQ99835 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SMOQ99835 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SMOQ99835 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
SMOQ99835 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC21.07■□□□□ 0.96
SMOQ99835 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC21.07■□□□□ 0.96
SMOQ99835 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SMOQ99835 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
SMOQ99835 MTDHP1-201ENST00000605323 784 ntBASIC21.07■□□□□ 0.96
SMOQ99835 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC21.07■□□□□ 0.96
SMOQ99835 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
SMOQ99835 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SMOQ99835 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SMOQ99835 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SMOQ99835 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
SMOQ99835 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SMOQ99835 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SMOQ99835 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SMOQ99835 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
SMOQ99835 GCSHP5-201ENST00000443090 522 ntBASIC21.06■□□□□ 0.96
SMOQ99835 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC21.06■□□□□ 0.96
SMOQ99835 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC21.06■□□□□ 0.96
SMOQ99835 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC21.06■□□□□ 0.96
SMOQ99835 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC21.06■□□□□ 0.96
SMOQ99835 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC21.06■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms