Protein–RNA interactions for Protein: Q99684

GFI1, Zinc finger protein Gfi-1, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFI1Q99684 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC17.33■□□□□ 0.37
GFI1Q99684 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
GFI1Q99684 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC17.33■□□□□ 0.36
GFI1Q99684 AC007322.3-201ENST00000426526 701 ntBASIC17.33■□□□□ 0.36
GFI1Q99684 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC17.33■□□□□ 0.36
GFI1Q99684 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC17.33■□□□□ 0.36
GFI1Q99684 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC17.33■□□□□ 0.36
GFI1Q99684 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
GFI1Q99684 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
GFI1Q99684 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
GFI1Q99684 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
GFI1Q99684 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
GFI1Q99684 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
GFI1Q99684 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
GFI1Q99684 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
GFI1Q99684 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
GFI1Q99684 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
GFI1Q99684 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
GFI1Q99684 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
GFI1Q99684 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
GFI1Q99684 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC17.32■□□□□ 0.36
GFI1Q99684 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC17.32■□□□□ 0.36
GFI1Q99684 DUX4L2-201ENST00000561772 1275 ntBASIC17.32■□□□□ 0.36
GFI1Q99684 AC104187.1-201ENST00000607510 612 ntBASIC17.32■□□□□ 0.36
GFI1Q99684 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC17.32■□□□□ 0.36
GFI1Q99684 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC17.32■□□□□ 0.36
GFI1Q99684 DUX4L6-201ENST00000626483 1275 ntBASIC17.32■□□□□ 0.36
GFI1Q99684 DUX4L1-201ENST00000627662 1275 ntBASIC17.32■□□□□ 0.36
GFI1Q99684 DUX4L8-201ENST00000629013 1275 ntBASIC17.32■□□□□ 0.36
GFI1Q99684 DUX4L3-201ENST00000630187 1275 ntBASIC17.32■□□□□ 0.36
GFI1Q99684 DUX4L7-201ENST00000630678 1275 ntBASIC17.32■□□□□ 0.36
GFI1Q99684 DUX4L5-201ENST00000630834 1275 ntBASIC17.32■□□□□ 0.36
GFI1Q99684 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
GFI1Q99684 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC17.32■□□□□ 0.36
GFI1Q99684 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
GFI1Q99684 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC17.31■□□□□ 0.36
GFI1Q99684 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
GFI1Q99684 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
GFI1Q99684 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
GFI1Q99684 RBM17P2-201ENST00000616397 1405 ntBASIC17.31■□□□□ 0.36
GFI1Q99684 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
GFI1Q99684 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
GFI1Q99684 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
GFI1Q99684 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
GFI1Q99684 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC17.31■□□□□ 0.36
GFI1Q99684 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC17.31■□□□□ 0.36
GFI1Q99684 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
GFI1Q99684 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC17.31■□□□□ 0.36
GFI1Q99684 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC17.31■□□□□ 0.36
GFI1Q99684 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC17.31■□□□□ 0.36
GFI1Q99684 AC243732.1-201ENST00000612648 864 ntBASIC17.31■□□□□ 0.36
GFI1Q99684 AL358852.1-201ENST00000623174 1268 ntBASIC17.31■□□□□ 0.36
GFI1Q99684 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
GFI1Q99684 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
GFI1Q99684 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
GFI1Q99684 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
GFI1Q99684 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
GFI1Q99684 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
GFI1Q99684 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
GFI1Q99684 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC17.31■□□□□ 0.36
GFI1Q99684 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
GFI1Q99684 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC17.3■□□□□ 0.36
GFI1Q99684 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
GFI1Q99684 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC17.3■□□□□ 0.36
GFI1Q99684 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
GFI1Q99684 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
GFI1Q99684 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
GFI1Q99684 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
GFI1Q99684 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
GFI1Q99684 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
GFI1Q99684 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
GFI1Q99684 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
GFI1Q99684 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
GFI1Q99684 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC17.3■□□□□ 0.36
GFI1Q99684 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC17.3■□□□□ 0.36
GFI1Q99684 AP001160.3-201ENST00000601484 763 ntBASIC17.3■□□□□ 0.36
GFI1Q99684 AC009237.14-201ENST00000609975 1594 ntBASIC17.3■□□□□ 0.36
GFI1Q99684 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
GFI1Q99684 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
GFI1Q99684 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
GFI1Q99684 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
GFI1Q99684 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
GFI1Q99684 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
GFI1Q99684 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
GFI1Q99684 AL032819.2-201ENST00000624543 2162 ntBASIC17.29■□□□□ 0.36
GFI1Q99684 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
GFI1Q99684 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC17.29■□□□□ 0.36
GFI1Q99684 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
GFI1Q99684 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
GFI1Q99684 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
GFI1Q99684 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
GFI1Q99684 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
GFI1Q99684 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC17.29■□□□□ 0.36
GFI1Q99684 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC17.29■□□□□ 0.36
GFI1Q99684 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
GFI1Q99684 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
GFI1Q99684 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
GFI1Q99684 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
GFI1Q99684 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC17.29■□□□□ 0.36
GFI1Q99684 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms