Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC20.32■□□□□ 0.84
PHOX2BQ99453 FAM8A6P-201ENST00000407496 1135 ntBASIC20.32■□□□□ 0.84
PHOX2BQ99453 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
PHOX2BQ99453 AC007322.3-201ENST00000426526 701 ntBASIC20.32■□□□□ 0.84
PHOX2BQ99453 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC20.32■□□□□ 0.84
PHOX2BQ99453 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
PHOX2BQ99453 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PHOX2BQ99453 AC091390.4-202ENST00000476426 537 ntBASIC20.32■□□□□ 0.84
PHOX2BQ99453 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.32■□□□□ 0.84
PHOX2BQ99453 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.32■□□□□ 0.84
PHOX2BQ99453 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
PHOX2BQ99453 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
PHOX2BQ99453 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PHOX2BQ99453 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20.31■□□□□ 0.84
PHOX2BQ99453 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PHOX2BQ99453 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PHOX2BQ99453 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC20.31■□□□□ 0.84
PHOX2BQ99453 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
PHOX2BQ99453 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
PHOX2BQ99453 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
PHOX2BQ99453 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC20.31■□□□□ 0.84
PHOX2BQ99453 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
PHOX2BQ99453 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PHOX2BQ99453 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PHOX2BQ99453 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC20.31■□□□□ 0.84
PHOX2BQ99453 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC20.31■□□□□ 0.84
PHOX2BQ99453 KRT18P16-201ENST00000510337 1294 ntBASIC20.31■□□□□ 0.84
PHOX2BQ99453 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PHOX2BQ99453 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PHOX2BQ99453 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PHOX2BQ99453 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PHOX2BQ99453 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC20.31■□□□□ 0.84
PHOX2BQ99453 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC20.3■□□□□ 0.84
PHOX2BQ99453 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
PHOX2BQ99453 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PHOX2BQ99453 RER1-204ENST00000378518 522 ntTSL 3 BASIC20.3■□□□□ 0.84
PHOX2BQ99453 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PHOX2BQ99453 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PHOX2BQ99453 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC20.3■□□□□ 0.84
PHOX2BQ99453 AC128688.1-201ENST00000487626 519 ntBASIC20.3■□□□□ 0.84
PHOX2BQ99453 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PHOX2BQ99453 CD320-202ENST00000537716 1119 ntTSL 2 BASIC20.3■□□□□ 0.84
PHOX2BQ99453 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC20.3■□□□□ 0.84
PHOX2BQ99453 NDUFV2-AS1-203ENST00000608008 779 ntBASIC20.3■□□□□ 0.84
PHOX2BQ99453 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PHOX2BQ99453 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PHOX2BQ99453 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
PHOX2BQ99453 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PHOX2BQ99453 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PHOX2BQ99453 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PHOX2BQ99453 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PHOX2BQ99453 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC20.29■□□□□ 0.84
PHOX2BQ99453 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PHOX2BQ99453 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC20.29■□□□□ 0.84
PHOX2BQ99453 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PHOX2BQ99453 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PHOX2BQ99453 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PHOX2BQ99453 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC20.29■□□□□ 0.84
PHOX2BQ99453 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC20.29■□□□□ 0.84
PHOX2BQ99453 AC116562.2-201ENST00000507042 360 ntBASIC20.29■□□□□ 0.84
PHOX2BQ99453 FAM86EP-206ENST00000510506 987 ntBASIC20.29■□□□□ 0.84
PHOX2BQ99453 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC20.29■□□□□ 0.84
PHOX2BQ99453 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PHOX2BQ99453 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC20.29■□□□□ 0.84
PHOX2BQ99453 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC20.29■□□□□ 0.84
PHOX2BQ99453 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
PHOX2BQ99453 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PHOX2BQ99453 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
PHOX2BQ99453 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
PHOX2BQ99453 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PHOX2BQ99453 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC20.28■□□□□ 0.84
PHOX2BQ99453 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
PHOX2BQ99453 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC20.28■□□□□ 0.84
PHOX2BQ99453 AC137767.1-201ENST00000602918 1920 ntBASIC20.28■□□□□ 0.84
PHOX2BQ99453 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC20.28■□□□□ 0.84
PHOX2BQ99453 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PHOX2BQ99453 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.28■□□□□ 0.84
PHOX2BQ99453 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
PHOX2BQ99453 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC20.28■□□□□ 0.84
PHOX2BQ99453 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC20.28■□□□□ 0.84
PHOX2BQ99453 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.28■□□□□ 0.84
PHOX2BQ99453 FDX1P1-201ENST00000449115 551 ntBASIC20.28■□□□□ 0.84
PHOX2BQ99453 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.28■□□□□ 0.84
PHOX2BQ99453 F2R-202ENST00000505600 442 ntTSL 2 BASIC20.28■□□□□ 0.84
PHOX2BQ99453 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC20.28■□□□□ 0.84
PHOX2BQ99453 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PHOX2BQ99453 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC20.28■□□□□ 0.84
PHOX2BQ99453 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PHOX2BQ99453 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
PHOX2BQ99453 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
PHOX2BQ99453 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
PHOX2BQ99453 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PHOX2BQ99453 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PHOX2BQ99453 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC20.28■□□□□ 0.84
PHOX2BQ99453 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PHOX2BQ99453 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PHOX2BQ99453 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
PHOX2BQ99453 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC20.27■□□□□ 0.84
PHOX2BQ99453 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC20.27■□□□□ 0.84
PHOX2BQ99453 IER3-202ENST00000376377 1350 ntBASIC20.27■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms