Protein–RNA interactions for Protein: Q96T58

SPEN, Msx2-interacting protein, humanhuman

Known RBP Predictions only

Length 3,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPENQ96T58 MFF-203ENST00000349901 1716 ntTSL 2 BASIC18.22■□□□□ 0.51
SPENQ96T58 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC18.22■□□□□ 0.51
SPENQ96T58 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
SPENQ96T58 KRT8P36-201ENST00000489121 1440 ntBASIC18.22■□□□□ 0.51
SPENQ96T58 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC18.22■□□□□ 0.51
SPENQ96T58 WWC2-AS2-201ENST00000578387 2183 ntBASIC18.22■□□□□ 0.51
SPENQ96T58 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SPENQ96T58 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC18.22■□□□□ 0.51
SPENQ96T58 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SPENQ96T58 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC18.22■□□□□ 0.51
SPENQ96T58 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SPENQ96T58 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC18.22■□□□□ 0.51
SPENQ96T58 AC242852.2-201ENST00000615738 1807 ntBASIC18.22■□□□□ 0.51
SPENQ96T58 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
SPENQ96T58 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC18.22■□□□□ 0.51
SPENQ96T58 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC18.22■□□□□ 0.51
SPENQ96T58 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SPENQ96T58 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SPENQ96T58 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SPENQ96T58 USF2-205ENST00000594064 1179 ntTSL 2 BASIC18.22■□□□□ 0.51
SPENQ96T58 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SPENQ96T58 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC18.22■□□□□ 0.51
SPENQ96T58 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SPENQ96T58 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
SPENQ96T58 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
SPENQ96T58 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SPENQ96T58 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC18.21■□□□□ 0.51
SPENQ96T58 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC18.21■□□□□ 0.51
SPENQ96T58 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
SPENQ96T58 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
SPENQ96T58 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SPENQ96T58 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SPENQ96T58 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
SPENQ96T58 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SPENQ96T58 NMU-205ENST00000511469 756 ntTSL 3 BASIC18.21■□□□□ 0.51
SPENQ96T58 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
SPENQ96T58 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SPENQ96T58 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SPENQ96T58 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
SPENQ96T58 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC18.21■□□□□ 0.51
SPENQ96T58 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC18.21■□□□□ 0.51
SPENQ96T58 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SPENQ96T58 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC18.21■□□□□ 0.51
SPENQ96T58 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SPENQ96T58 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SPENQ96T58 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
SPENQ96T58 LINC01568-207ENST00000641790 1380 ntBASIC18.2■□□□□ 0.5
SPENQ96T58 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SPENQ96T58 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC18.2■□□□□ 0.5
SPENQ96T58 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SPENQ96T58 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
SPENQ96T58 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
SPENQ96T58 AC027702.1-201ENST00000563810 1770 ntBASIC18.2■□□□□ 0.5
SPENQ96T58 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC18.2■□□□□ 0.5
SPENQ96T58 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SPENQ96T58 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC18.2■□□□□ 0.5
SPENQ96T58 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SPENQ96T58 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SPENQ96T58 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
SPENQ96T58 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC18.2■□□□□ 0.5
SPENQ96T58 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC18.2■□□□□ 0.5
SPENQ96T58 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC18.2■□□□□ 0.5
SPENQ96T58 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC18.2■□□□□ 0.5
SPENQ96T58 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
SPENQ96T58 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC18.2■□□□□ 0.5
SPENQ96T58 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SPENQ96T58 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SPENQ96T58 GUK1-204ENST00000366721 689 ntTSL 3 BASIC18.19■□□□□ 0.5
SPENQ96T58 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SPENQ96T58 MESTP1-201ENST00000404287 994 ntBASIC18.19■□□□□ 0.5
SPENQ96T58 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
SPENQ96T58 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SPENQ96T58 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC18.19■□□□□ 0.5
SPENQ96T58 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC18.19■□□□□ 0.5
SPENQ96T58 PTBP1P-201ENST00000554374 1601 ntBASIC18.19■□□□□ 0.5
SPENQ96T58 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC18.19■□□□□ 0.5
SPENQ96T58 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SPENQ96T58 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SPENQ96T58 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SPENQ96T58 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
SPENQ96T58 UPK3BP1-201ENST00000428678 509 ntBASIC18.19■□□□□ 0.5
SPENQ96T58 F2R-202ENST00000505600 442 ntTSL 2 BASIC18.19■□□□□ 0.5
SPENQ96T58 AC010203.1-204ENST00000548782 407 ntBASIC18.19■□□□□ 0.5
SPENQ96T58 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC18.19■□□□□ 0.5
SPENQ96T58 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SPENQ96T58 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SPENQ96T58 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
SPENQ96T58 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC18.19■□□□□ 0.5
SPENQ96T58 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC18.19■□□□□ 0.5
SPENQ96T58 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SPENQ96T58 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC18.18■□□□□ 0.5
SPENQ96T58 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
SPENQ96T58 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SPENQ96T58 WWOX-216ENST00000569818 525 ntBASIC18.18■□□□□ 0.5
SPENQ96T58 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC18.18■□□□□ 0.5
SPENQ96T58 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SPENQ96T58 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SPENQ96T58 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SPENQ96T58 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SPENQ96T58 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms