Protein–RNA interactions for Protein: Q96RK1

CITED4, Cbp/p300-interacting transactivator 4, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CITED4Q96RK1 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CITED4Q96RK1 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CITED4Q96RK1 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC17.12■□□□□ 0.33
CITED4Q96RK1 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CITED4Q96RK1 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CITED4Q96RK1 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC17.11■□□□□ 0.33
CITED4Q96RK1 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CITED4Q96RK1 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CITED4Q96RK1 AL512408.1-201ENST00000569378 2000 ntBASIC17.11■□□□□ 0.33
CITED4Q96RK1 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CITED4Q96RK1 AC005332.7-201ENST00000614046 2005 ntBASIC17.11■□□□□ 0.33
CITED4Q96RK1 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
CITED4Q96RK1 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CITED4Q96RK1 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC17.11■□□□□ 0.33
CITED4Q96RK1 AL022069.1-201ENST00000568025 1636 ntBASIC17.11■□□□□ 0.33
CITED4Q96RK1 AC011270.2-201ENST00000624293 2550 ntBASIC17.11■□□□□ 0.33
CITED4Q96RK1 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CITED4Q96RK1 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC17.11■□□□□ 0.33
CITED4Q96RK1 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC17.11■□□□□ 0.33
CITED4Q96RK1 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC17.11■□□□□ 0.33
CITED4Q96RK1 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
CITED4Q96RK1 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CITED4Q96RK1 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC17.11■□□□□ 0.33
CITED4Q96RK1 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CITED4Q96RK1 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
CITED4Q96RK1 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CITED4Q96RK1 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC17.1■□□□□ 0.33
CITED4Q96RK1 DET1-207ENST00000564406 2315 ntTSL 2 BASIC17.1■□□□□ 0.33
CITED4Q96RK1 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC17.1■□□□□ 0.33
CITED4Q96RK1 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CITED4Q96RK1 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CITED4Q96RK1 LINC01960-201ENST00000563759 1884 ntBASIC17.1■□□□□ 0.33
CITED4Q96RK1 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CITED4Q96RK1 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CITED4Q96RK1 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CITED4Q96RK1 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC17.1■□□□□ 0.33
CITED4Q96RK1 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC17.1■□□□□ 0.33
CITED4Q96RK1 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CITED4Q96RK1 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC17.1■□□□□ 0.33
CITED4Q96RK1 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CITED4Q96RK1 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC17.1■□□□□ 0.33
CITED4Q96RK1 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
CITED4Q96RK1 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC17.1■□□□□ 0.33
CITED4Q96RK1 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
CITED4Q96RK1 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC17.1■□□□□ 0.33
CITED4Q96RK1 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CITED4Q96RK1 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CITED4Q96RK1 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
CITED4Q96RK1 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
CITED4Q96RK1 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CITED4Q96RK1 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CITED4Q96RK1 AC131274.2-201ENST00000580697 1507 ntBASIC17.1■□□□□ 0.33
CITED4Q96RK1 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CITED4Q96RK1 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
CITED4Q96RK1 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC17.1■□□□□ 0.33
CITED4Q96RK1 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CITED4Q96RK1 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC17.1■□□□□ 0.33
CITED4Q96RK1 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC17.1■□□□□ 0.33
CITED4Q96RK1 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CITED4Q96RK1 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC17.09■□□□□ 0.33
CITED4Q96RK1 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CITED4Q96RK1 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CITED4Q96RK1 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CITED4Q96RK1 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
CITED4Q96RK1 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC17.09■□□□□ 0.33
CITED4Q96RK1 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CITED4Q96RK1 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CITED4Q96RK1 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CITED4Q96RK1 EXOG-217ENST00000630638 197 ntTSL 5 BASIC17.09■□□□□ 0.33
CITED4Q96RK1 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CITED4Q96RK1 AL162377.1-201ENST00000618844 1793 ntBASIC17.09■□□□□ 0.33
CITED4Q96RK1 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CITED4Q96RK1 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC17.09■□□□□ 0.33
CITED4Q96RK1 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CITED4Q96RK1 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC17.09■□□□□ 0.33
CITED4Q96RK1 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
CITED4Q96RK1 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
CITED4Q96RK1 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CITED4Q96RK1 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC17.08■□□□□ 0.33
CITED4Q96RK1 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CITED4Q96RK1 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CITED4Q96RK1 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CITED4Q96RK1 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
CITED4Q96RK1 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC17.08■□□□□ 0.33
CITED4Q96RK1 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC17.08■□□□□ 0.33
CITED4Q96RK1 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CITED4Q96RK1 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC17.08■□□□□ 0.33
CITED4Q96RK1 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC17.08■□□□□ 0.33
CITED4Q96RK1 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
CITED4Q96RK1 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC17.08■□□□□ 0.33
CITED4Q96RK1 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
CITED4Q96RK1 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CITED4Q96RK1 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CITED4Q96RK1 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC17.08■□□□□ 0.32
CITED4Q96RK1 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC17.08■□□□□ 0.32
CITED4Q96RK1 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC17.08■□□□□ 0.32
CITED4Q96RK1 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CITED4Q96RK1 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
CITED4Q96RK1 CLTA-206ENST00000466396 695 ntTSL 2 BASIC17.08■□□□□ 0.32
CITED4Q96RK1 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms