Protein–RNA interactions for Protein: Q96QU1

PCDH15, Protocadherin-15, humanhuman

Predictions only

Length 1,955 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH15Q96QU1 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC19.7■□□□□ 0.74
PCDH15Q96QU1 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PCDH15Q96QU1 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
PCDH15Q96QU1 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC19.69■□□□□ 0.74
PCDH15Q96QU1 PTBP1P-201ENST00000554374 1601 ntBASIC19.69■□□□□ 0.74
PCDH15Q96QU1 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC19.69■□□□□ 0.74
PCDH15Q96QU1 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCDH15Q96QU1 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCDH15Q96QU1 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCDH15Q96QU1 AC005363.2-201ENST00000618631 242 ntBASIC19.69■□□□□ 0.74
PCDH15Q96QU1 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCDH15Q96QU1 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
PCDH15Q96QU1 AC244015.2-201ENST00000616358 1861 ntBASIC19.69■□□□□ 0.74
PCDH15Q96QU1 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCDH15Q96QU1 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC19.68■□□□□ 0.74
PCDH15Q96QU1 AP002982.1-201ENST00000492365 877 ntBASIC19.68■□□□□ 0.74
PCDH15Q96QU1 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PCDH15Q96QU1 FITM1-202ENST00000559294 800 ntBASIC19.68■□□□□ 0.74
PCDH15Q96QU1 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
PCDH15Q96QU1 AC004264.1-201ENST00000608354 794 ntBASIC19.68■□□□□ 0.74
PCDH15Q96QU1 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC19.68■□□□□ 0.74
PCDH15Q96QU1 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PCDH15Q96QU1 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PCDH15Q96QU1 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PCDH15Q96QU1 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PCDH15Q96QU1 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PCDH15Q96QU1 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PCDH15Q96QU1 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC19.68■□□□□ 0.74
PCDH15Q96QU1 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
PCDH15Q96QU1 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC19.68■□□□□ 0.74
PCDH15Q96QU1 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC19.68■□□□□ 0.74
PCDH15Q96QU1 RMI2-205ENST00000576027 818 ntTSL 2 BASIC19.68■□□□□ 0.74
PCDH15Q96QU1 AL590326.2-201ENST00000625139 305 ntBASIC19.68■□□□□ 0.74
PCDH15Q96QU1 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
PCDH15Q96QU1 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PCDH15Q96QU1 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
PCDH15Q96QU1 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
PCDH15Q96QU1 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
PCDH15Q96QU1 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDH15Q96QU1 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDH15Q96QU1 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDH15Q96QU1 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDH15Q96QU1 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDH15Q96QU1 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PCDH15Q96QU1 CFL2-205ENST00000555765 632 ntTSL 2 BASIC19.67■□□□□ 0.74
PCDH15Q96QU1 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PCDH15Q96QU1 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC19.67■□□□□ 0.74
PCDH15Q96QU1 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDH15Q96QU1 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC19.67■□□□□ 0.74
PCDH15Q96QU1 AL024507.2-201ENST00000606070 2574 ntBASIC19.67■□□□□ 0.74
PCDH15Q96QU1 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PCDH15Q96QU1 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDH15Q96QU1 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PCDH15Q96QU1 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
PCDH15Q96QU1 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDH15Q96QU1 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDH15Q96QU1 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC19.67■□□□□ 0.74
PCDH15Q96QU1 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDH15Q96QU1 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PCDH15Q96QU1 KSR1P1-201ENST00000446298 240 ntBASIC19.66■□□□□ 0.74
PCDH15Q96QU1 DUX4L26-201ENST00000489078 1255 ntBASIC19.66■□□□□ 0.74
PCDH15Q96QU1 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
PCDH15Q96QU1 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
PCDH15Q96QU1 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PCDH15Q96QU1 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
PCDH15Q96QU1 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PCDH15Q96QU1 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PCDH15Q96QU1 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
PCDH15Q96QU1 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PCDH15Q96QU1 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
PCDH15Q96QU1 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
PCDH15Q96QU1 LTBR-211ENST00000543190 785 ntTSL 3 BASIC19.66■□□□□ 0.74
PCDH15Q96QU1 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC19.66■□□□□ 0.74
PCDH15Q96QU1 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC19.66■□□□□ 0.74
PCDH15Q96QU1 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PCDH15Q96QU1 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCDH15Q96QU1 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC19.65■□□□□ 0.74
PCDH15Q96QU1 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC19.65■□□□□ 0.74
PCDH15Q96QU1 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCDH15Q96QU1 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC19.65■□□□□ 0.74
PCDH15Q96QU1 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCDH15Q96QU1 NAPSB-206ENST00000562112 1266 ntBASIC19.65■□□□□ 0.74
PCDH15Q96QU1 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
PCDH15Q96QU1 NTF6B-201ENST00000591913 560 ntBASIC19.65■□□□□ 0.74
PCDH15Q96QU1 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
PCDH15Q96QU1 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC19.65■□□□□ 0.74
PCDH15Q96QU1 PARN-205ENST00000539279 1557 ntTSL 2 BASIC19.65■□□□□ 0.74
PCDH15Q96QU1 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
PCDH15Q96QU1 KRT18P22-201ENST00000402024 1347 ntBASIC19.65■□□□□ 0.74
PCDH15Q96QU1 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCDH15Q96QU1 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
PCDH15Q96QU1 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC19.65■□□□□ 0.74
PCDH15Q96QU1 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCDH15Q96QU1 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
PCDH15Q96QU1 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC19.64■□□□□ 0.74
PCDH15Q96QU1 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC19.64■□□□□ 0.74
PCDH15Q96QU1 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC19.64■□□□□ 0.74
PCDH15Q96QU1 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
PCDH15Q96QU1 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
PCDH15Q96QU1 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms