Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CSMD1Q96PZ7 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CSMD1Q96PZ7 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CSMD1Q96PZ7 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CSMD1Q96PZ7 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CSMD1Q96PZ7 FAM86EP-206ENST00000510506 987 ntBASIC17.18■□□□□ 0.34
CSMD1Q96PZ7 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC17.18■□□□□ 0.34
CSMD1Q96PZ7 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC17.18■□□□□ 0.34
CSMD1Q96PZ7 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC17.18■□□□□ 0.34
CSMD1Q96PZ7 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CSMD1Q96PZ7 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CSMD1Q96PZ7 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CSMD1Q96PZ7 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
CSMD1Q96PZ7 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CSMD1Q96PZ7 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CSMD1Q96PZ7 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CSMD1Q96PZ7 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC17.18■□□□□ 0.34
CSMD1Q96PZ7 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CSMD1Q96PZ7 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CSMD1Q96PZ7 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CSMD1Q96PZ7 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC17.17■□□□□ 0.34
CSMD1Q96PZ7 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CSMD1Q96PZ7 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC17.17■□□□□ 0.34
CSMD1Q96PZ7 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC17.17■□□□□ 0.34
CSMD1Q96PZ7 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
CSMD1Q96PZ7 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CSMD1Q96PZ7 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CSMD1Q96PZ7 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CSMD1Q96PZ7 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CSMD1Q96PZ7 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC17.17■□□□□ 0.34
CSMD1Q96PZ7 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CSMD1Q96PZ7 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
CSMD1Q96PZ7 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
CSMD1Q96PZ7 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
CSMD1Q96PZ7 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
CSMD1Q96PZ7 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CSMD1Q96PZ7 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC17.17■□□□□ 0.34
CSMD1Q96PZ7 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CSMD1Q96PZ7 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
CSMD1Q96PZ7 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC17.17■□□□□ 0.34
CSMD1Q96PZ7 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CSMD1Q96PZ7 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
CSMD1Q96PZ7 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
CSMD1Q96PZ7 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC17.16■□□□□ 0.34
CSMD1Q96PZ7 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC17.16■□□□□ 0.34
CSMD1Q96PZ7 AC091390.4-202ENST00000476426 537 ntBASIC17.16■□□□□ 0.34
CSMD1Q96PZ7 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CSMD1Q96PZ7 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CSMD1Q96PZ7 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CSMD1Q96PZ7 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CSMD1Q96PZ7 AC233723.2-201ENST00000623798 2106 ntBASIC17.16■□□□□ 0.34
CSMD1Q96PZ7 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CSMD1Q96PZ7 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC17.16■□□□□ 0.34
CSMD1Q96PZ7 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC17.16■□□□□ 0.34
CSMD1Q96PZ7 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CSMD1Q96PZ7 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC17.16■□□□□ 0.34
CSMD1Q96PZ7 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
CSMD1Q96PZ7 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CSMD1Q96PZ7 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC17.16■□□□□ 0.34
CSMD1Q96PZ7 AC005332.1-201ENST00000577698 1310 ntBASIC17.16■□□□□ 0.34
CSMD1Q96PZ7 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CSMD1Q96PZ7 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CSMD1Q96PZ7 RER1-204ENST00000378518 522 ntTSL 3 BASIC17.15■□□□□ 0.34
CSMD1Q96PZ7 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC17.15■□□□□ 0.34
CSMD1Q96PZ7 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC17.15■□□□□ 0.34
CSMD1Q96PZ7 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC17.15■□□□□ 0.34
CSMD1Q96PZ7 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC17.15■□□□□ 0.34
CSMD1Q96PZ7 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
CSMD1Q96PZ7 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CSMD1Q96PZ7 SLC25A1P4-201ENST00000567977 778 ntBASIC17.15■□□□□ 0.34
CSMD1Q96PZ7 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC17.15■□□□□ 0.34
CSMD1Q96PZ7 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
CSMD1Q96PZ7 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
CSMD1Q96PZ7 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC17.15■□□□□ 0.34
CSMD1Q96PZ7 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC17.15■□□□□ 0.34
CSMD1Q96PZ7 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CSMD1Q96PZ7 MESTP1-201ENST00000404287 994 ntBASIC17.15■□□□□ 0.34
CSMD1Q96PZ7 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CSMD1Q96PZ7 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC17.15■□□□□ 0.34
CSMD1Q96PZ7 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC17.15■□□□□ 0.34
CSMD1Q96PZ7 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.34
CSMD1Q96PZ7 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
CSMD1Q96PZ7 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
CSMD1Q96PZ7 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC17.14■□□□□ 0.34
CSMD1Q96PZ7 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CSMD1Q96PZ7 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CSMD1Q96PZ7 LIN28AP1-201ENST00000429574 405 ntBASIC17.14■□□□□ 0.33
CSMD1Q96PZ7 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
CSMD1Q96PZ7 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
CSMD1Q96PZ7 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CSMD1Q96PZ7 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
CSMD1Q96PZ7 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CSMD1Q96PZ7 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CSMD1Q96PZ7 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC17.14■□□□□ 0.33
CSMD1Q96PZ7 YBX1P2-201ENST00000489612 999 ntBASIC17.14■□□□□ 0.33
CSMD1Q96PZ7 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC17.14■□□□□ 0.33
CSMD1Q96PZ7 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC17.14■□□□□ 0.33
CSMD1Q96PZ7 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CSMD1Q96PZ7 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CSMD1Q96PZ7 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms