Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
NEK1Q96PY6 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
NEK1Q96PY6 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
NEK1Q96PY6 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
NEK1Q96PY6 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
NEK1Q96PY6 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
NEK1Q96PY6 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
NEK1Q96PY6 KRT8P17-201ENST00000453110 1448 ntBASIC23.78■■□□□ 1.4
NEK1Q96PY6 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
NEK1Q96PY6 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
NEK1Q96PY6 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
NEK1Q96PY6 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
NEK1Q96PY6 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
NEK1Q96PY6 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
NEK1Q96PY6 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC23.78■■□□□ 1.4
NEK1Q96PY6 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC23.78■■□□□ 1.4
NEK1Q96PY6 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
NEK1Q96PY6 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
NEK1Q96PY6 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
NEK1Q96PY6 AL691432.2-201ENST00000607222 2038 ntBASIC23.77■■□□□ 1.4
NEK1Q96PY6 ADM-207ENST00000530439 1839 ntTSL 2 BASIC23.77■■□□□ 1.4
NEK1Q96PY6 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC23.77■■□□□ 1.4
NEK1Q96PY6 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
NEK1Q96PY6 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
NEK1Q96PY6 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC23.77■■□□□ 1.4
NEK1Q96PY6 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
NEK1Q96PY6 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
NEK1Q96PY6 GPX1P1-201ENST00000388829 606 ntBASIC23.77■■□□□ 1.4
NEK1Q96PY6 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC23.77■■□□□ 1.4
NEK1Q96PY6 TSPY6P-201ENST00000448518 926 ntBASIC23.77■■□□□ 1.4
NEK1Q96PY6 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
NEK1Q96PY6 TK2-208ENST00000545043 1120 ntTSL 2 BASIC23.77■■□□□ 1.4
NEK1Q96PY6 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
NEK1Q96PY6 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
NEK1Q96PY6 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
NEK1Q96PY6 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
NEK1Q96PY6 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC23.76■■□□□ 1.39
NEK1Q96PY6 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
NEK1Q96PY6 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC23.76■■□□□ 1.39
NEK1Q96PY6 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
NEK1Q96PY6 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC23.76■■□□□ 1.39
NEK1Q96PY6 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC23.76■■□□□ 1.39
NEK1Q96PY6 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC23.76■■□□□ 1.39
NEK1Q96PY6 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC23.76■■□□□ 1.39
NEK1Q96PY6 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
NEK1Q96PY6 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC23.76■■□□□ 1.39
NEK1Q96PY6 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC23.76■■□□□ 1.39
NEK1Q96PY6 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
NEK1Q96PY6 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC23.76■■□□□ 1.39
NEK1Q96PY6 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
NEK1Q96PY6 AFG3L1P-217ENST00000557444 2447 ntBASIC23.75■■□□□ 1.39
NEK1Q96PY6 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
NEK1Q96PY6 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
NEK1Q96PY6 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC23.75■■□□□ 1.39
NEK1Q96PY6 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
NEK1Q96PY6 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC23.75■■□□□ 1.39
NEK1Q96PY6 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC23.75■■□□□ 1.39
NEK1Q96PY6 AL031963.3-201ENST00000606441 850 ntBASIC23.75■■□□□ 1.39
NEK1Q96PY6 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC23.75■■□□□ 1.39
NEK1Q96PY6 GXYLT1P5-201ENST00000614548 1189 ntBASIC23.75■■□□□ 1.39
NEK1Q96PY6 CD37-204ENST00000535669 1674 ntTSL 2 BASIC23.75■■□□□ 1.39
NEK1Q96PY6 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
NEK1Q96PY6 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC23.75■■□□□ 1.39
NEK1Q96PY6 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
NEK1Q96PY6 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
NEK1Q96PY6 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
NEK1Q96PY6 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
NEK1Q96PY6 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC23.74■■□□□ 1.39
NEK1Q96PY6 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
NEK1Q96PY6 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
NEK1Q96PY6 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
NEK1Q96PY6 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
NEK1Q96PY6 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC23.74■■□□□ 1.39
NEK1Q96PY6 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC23.74■■□□□ 1.39
NEK1Q96PY6 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
NEK1Q96PY6 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC23.74■■□□□ 1.39
NEK1Q96PY6 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC23.74■■□□□ 1.39
NEK1Q96PY6 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
NEK1Q96PY6 KRT8P20-201ENST00000423953 1409 ntBASIC23.74■■□□□ 1.39
NEK1Q96PY6 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
NEK1Q96PY6 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC23.74■■□□□ 1.39
NEK1Q96PY6 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
NEK1Q96PY6 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC23.73■■□□□ 1.39
NEK1Q96PY6 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
NEK1Q96PY6 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC23.73■■□□□ 1.39
NEK1Q96PY6 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC23.73■■□□□ 1.39
NEK1Q96PY6 SLC29A4P1-201ENST00000398760 971 ntBASIC23.73■■□□□ 1.39
NEK1Q96PY6 SERPINH1P1-201ENST00000419794 1249 ntBASIC23.73■■□□□ 1.39
NEK1Q96PY6 OR2A1-AS1-201ENST00000462305 773 ntBASIC23.73■■□□□ 1.39
NEK1Q96PY6 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC23.73■■□□□ 1.39
NEK1Q96PY6 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC23.73■■□□□ 1.39
NEK1Q96PY6 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC23.73■■□□□ 1.39
NEK1Q96PY6 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
NEK1Q96PY6 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
NEK1Q96PY6 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
NEK1Q96PY6 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
NEK1Q96PY6 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC23.73■■□□□ 1.39
NEK1Q96PY6 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC23.72■■□□□ 1.39
NEK1Q96PY6 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
NEK1Q96PY6 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms