Protein–RNA interactions for Protein: Q96PU9

ODF3, Outer dense fiber protein 3, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ODF3Q96PU9 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
ODF3Q96PU9 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ODF3Q96PU9 AC026271.2-201ENST00000428091 497 ntBASIC14.82□□□□□ -0.04
ODF3Q96PU9 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC14.82□□□□□ -0.04
ODF3Q96PU9 RARRES2P6-201ENST00000567333 442 ntBASIC14.82□□□□□ -0.04
ODF3Q96PU9 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC14.82□□□□□ -0.04
ODF3Q96PU9 CYP2T3P-201ENST00000601990 817 ntBASIC14.82□□□□□ -0.04
ODF3Q96PU9 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
ODF3Q96PU9 OR10C1-204ENST00000622521 1039 ntBASIC14.82□□□□□ -0.04
ODF3Q96PU9 PARP1-210ENST00000629232 477 ntTSL 5 BASIC14.82□□□□□ -0.04
ODF3Q96PU9 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
ODF3Q96PU9 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ODF3Q96PU9 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
ODF3Q96PU9 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ODF3Q96PU9 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC14.82□□□□□ -0.04
ODF3Q96PU9 KRT8P20-201ENST00000423953 1409 ntBASIC14.82□□□□□ -0.04
ODF3Q96PU9 KRT8P17-201ENST00000453110 1448 ntBASIC14.82□□□□□ -0.04
ODF3Q96PU9 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
ODF3Q96PU9 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ODF3Q96PU9 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
ODF3Q96PU9 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
ODF3Q96PU9 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
ODF3Q96PU9 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
ODF3Q96PU9 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
ODF3Q96PU9 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
ODF3Q96PU9 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
ODF3Q96PU9 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
ODF3Q96PU9 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC14.81□□□□□ -0.04
ODF3Q96PU9 ME3-201ENST00000323418 1068 ntTSL 5 BASIC14.81□□□□□ -0.04
ODF3Q96PU9 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ODF3Q96PU9 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
ODF3Q96PU9 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
ODF3Q96PU9 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
ODF3Q96PU9 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
ODF3Q96PU9 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC14.81□□□□□ -0.04
ODF3Q96PU9 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC14.81□□□□□ -0.04
ODF3Q96PU9 MIR5787-201ENST00000611784 55 ntBASIC14.81□□□□□ -0.04
ODF3Q96PU9 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC14.81□□□□□ -0.04
ODF3Q96PU9 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC14.81□□□□□ -0.04
ODF3Q96PU9 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
ODF3Q96PU9 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ODF3Q96PU9 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
ODF3Q96PU9 LBX2-AS1-202ENST00000603175 2083 ntBASIC14.81□□□□□ -0.04
ODF3Q96PU9 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC14.81□□□□□ -0.04
ODF3Q96PU9 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC14.81□□□□□ -0.04
ODF3Q96PU9 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ODF3Q96PU9 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC14.81□□□□□ -0.04
ODF3Q96PU9 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
ODF3Q96PU9 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC14.8□□□□□ -0.04
ODF3Q96PU9 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC14.8□□□□□ -0.04
ODF3Q96PU9 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ODF3Q96PU9 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
ODF3Q96PU9 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ODF3Q96PU9 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
ODF3Q96PU9 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
ODF3Q96PU9 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
ODF3Q96PU9 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
ODF3Q96PU9 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ODF3Q96PU9 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC14.8□□□□□ -0.04
ODF3Q96PU9 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ODF3Q96PU9 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ODF3Q96PU9 HLA-G-202ENST00000376815 851 ntBASIC14.8□□□□□ -0.04
ODF3Q96PU9 HLA-G-203ENST00000376818 1127 ntBASIC14.8□□□□□ -0.04
ODF3Q96PU9 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
ODF3Q96PU9 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
ODF3Q96PU9 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC14.8□□□□□ -0.04
ODF3Q96PU9 BRWD1-AS2-201ENST00000603064 1028 ntBASIC14.8□□□□□ -0.04
ODF3Q96PU9 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
ODF3Q96PU9 AL589743.5-201ENST00000616611 1050 ntBASIC14.8□□□□□ -0.04
ODF3Q96PU9 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ODF3Q96PU9 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
ODF3Q96PU9 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
ODF3Q96PU9 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ODF3Q96PU9 AC009237.14-201ENST00000609975 1594 ntBASIC14.8□□□□□ -0.04
ODF3Q96PU9 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ODF3Q96PU9 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC14.8□□□□□ -0.04
ODF3Q96PU9 AL691432.2-201ENST00000607222 2038 ntBASIC14.8□□□□□ -0.04
ODF3Q96PU9 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC14.8□□□□□ -0.04
ODF3Q96PU9 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ODF3Q96PU9 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ODF3Q96PU9 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
ODF3Q96PU9 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ODF3Q96PU9 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
ODF3Q96PU9 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
ODF3Q96PU9 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC14.79□□□□□ -0.04
ODF3Q96PU9 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC14.79□□□□□ -0.04
ODF3Q96PU9 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC14.79□□□□□ -0.04
ODF3Q96PU9 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC14.79□□□□□ -0.04
ODF3Q96PU9 AC007322.1-201ENST00000426983 750 ntBASIC14.79□□□□□ -0.04
ODF3Q96PU9 APTR-203ENST00000430801 583 ntTSL 5 BASIC14.79□□□□□ -0.04
ODF3Q96PU9 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC14.79□□□□□ -0.04
ODF3Q96PU9 HES2-205ENST00000487437 968 ntTSL 3 BASIC14.79□□□□□ -0.04
ODF3Q96PU9 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
ODF3Q96PU9 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC14.79□□□□□ -0.04
ODF3Q96PU9 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC14.79□□□□□ -0.04
ODF3Q96PU9 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
ODF3Q96PU9 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC14.79□□□□□ -0.04
ODF3Q96PU9 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC14.79□□□□□ -0.04
ODF3Q96PU9 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
ODF3Q96PU9 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC14.79□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms