Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
AP1S3Q96PC3 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
AP1S3Q96PC3 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
AP1S3Q96PC3 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
AP1S3Q96PC3 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
AP1S3Q96PC3 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
AP1S3Q96PC3 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
AP1S3Q96PC3 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
AP1S3Q96PC3 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
AP1S3Q96PC3 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC15.13■□□□□ 0.01
AP1S3Q96PC3 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC15.13■□□□□ 0.01
AP1S3Q96PC3 AC121338.2-201ENST00000622535 1744 ntBASIC15.13■□□□□ 0.01
AP1S3Q96PC3 AC136469.2-201ENST00000623944 1028 ntBASIC15.13■□□□□ 0.01
AP1S3Q96PC3 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
AP1S3Q96PC3 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
AP1S3Q96PC3 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
AP1S3Q96PC3 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC15.13■□□□□ 0.01
AP1S3Q96PC3 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC15.13■□□□□ 0.01
AP1S3Q96PC3 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC15.13■□□□□ 0.01
AP1S3Q96PC3 AC018445.3-201ENST00000624177 1945 ntBASIC15.13■□□□□ 0.01
AP1S3Q96PC3 PODN-203ENST00000395871 2744 ntTSL 5 BASIC15.13■□□□□ 0.01
AP1S3Q96PC3 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
AP1S3Q96PC3 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
AP1S3Q96PC3 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
AP1S3Q96PC3 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
AP1S3Q96PC3 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
AP1S3Q96PC3 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
AP1S3Q96PC3 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
AP1S3Q96PC3 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
AP1S3Q96PC3 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
AP1S3Q96PC3 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC15.12■□□□□ 0.01
AP1S3Q96PC3 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
AP1S3Q96PC3 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
AP1S3Q96PC3 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
AP1S3Q96PC3 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC15.12■□□□□ 0.01
AP1S3Q96PC3 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
AP1S3Q96PC3 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
AP1S3Q96PC3 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
AP1S3Q96PC3 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
AP1S3Q96PC3 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
AP1S3Q96PC3 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
AP1S3Q96PC3 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
AP1S3Q96PC3 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC15.12■□□□□ 0.01
AP1S3Q96PC3 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
AP1S3Q96PC3 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
AP1S3Q96PC3 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
AP1S3Q96PC3 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
AP1S3Q96PC3 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC15.12■□□□□ 0.01
AP1S3Q96PC3 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
AP1S3Q96PC3 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
AP1S3Q96PC3 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC15.12■□□□□ 0.01
AP1S3Q96PC3 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
AP1S3Q96PC3 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC15.12■□□□□ 0.01
AP1S3Q96PC3 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
AP1S3Q96PC3 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
AP1S3Q96PC3 AL158211.5-201ENST00000623583 2518 ntBASIC15.11■□□□□ 0.01
AP1S3Q96PC3 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
AP1S3Q96PC3 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
AP1S3Q96PC3 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
AP1S3Q96PC3 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
AP1S3Q96PC3 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
AP1S3Q96PC3 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
AP1S3Q96PC3 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
AP1S3Q96PC3 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
AP1S3Q96PC3 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
AP1S3Q96PC3 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
AP1S3Q96PC3 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC15.11■□□□□ 0.01
AP1S3Q96PC3 SLC47A1P1-202ENST00000449666 945 ntBASIC15.11■□□□□ 0.01
AP1S3Q96PC3 OR2A1-AS1-204ENST00000470435 602 ntBASIC15.11■□□□□ 0.01
AP1S3Q96PC3 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
AP1S3Q96PC3 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC15.11■□□□□ 0.01
AP1S3Q96PC3 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
AP1S3Q96PC3 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC15.11■□□□□ 0.01
AP1S3Q96PC3 AC011298.3-201ENST00000615796 283 ntBASIC15.11■□□□□ 0.01
AP1S3Q96PC3 AC068587.6-202ENST00000641839 5619 ntBASIC15.11■□□□□ 0.01
AP1S3Q96PC3 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC15.11■□□□□ 0.01
AP1S3Q96PC3 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
AP1S3Q96PC3 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC15.11■□□□□ 0.01
AP1S3Q96PC3 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
AP1S3Q96PC3 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC15.1■□□□□ 0.01
AP1S3Q96PC3 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
AP1S3Q96PC3 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
AP1S3Q96PC3 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
AP1S3Q96PC3 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC15.1■□□□□ 0.01
AP1S3Q96PC3 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
AP1S3Q96PC3 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
AP1S3Q96PC3 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
AP1S3Q96PC3 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC15.1■□□□□ 0.01
AP1S3Q96PC3 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC15.1■□□□□ 0.01
AP1S3Q96PC3 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
AP1S3Q96PC3 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC15.1■□□□□ 0.01
AP1S3Q96PC3 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
AP1S3Q96PC3 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
AP1S3Q96PC3 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC15.1■□□□□ 0.01
AP1S3Q96PC3 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
AP1S3Q96PC3 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC15.1■□□□□ 0.01
AP1S3Q96PC3 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
AP1S3Q96PC3 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
AP1S3Q96PC3 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
AP1S3Q96PC3 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms