Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
COL21A1Q96P44 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
COL21A1Q96P44 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC18.94■□□□□ 0.62
COL21A1Q96P44 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
COL21A1Q96P44 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
COL21A1Q96P44 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
COL21A1Q96P44 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC18.94■□□□□ 0.62
COL21A1Q96P44 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC18.94■□□□□ 0.62
COL21A1Q96P44 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC18.94■□□□□ 0.62
COL21A1Q96P44 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC18.94■□□□□ 0.62
COL21A1Q96P44 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
COL21A1Q96P44 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
COL21A1Q96P44 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
COL21A1Q96P44 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
COL21A1Q96P44 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
COL21A1Q96P44 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC18.93■□□□□ 0.62
COL21A1Q96P44 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC18.93■□□□□ 0.62
COL21A1Q96P44 PPP1R14BP3-201ENST00000509033 445 ntBASIC18.93■□□□□ 0.62
COL21A1Q96P44 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC18.93■□□□□ 0.62
COL21A1Q96P44 AC133552.2-202ENST00000575694 574 ntBASIC18.93■□□□□ 0.62
COL21A1Q96P44 AL050303.2-201ENST00000619798 666 ntBASIC18.93■□□□□ 0.62
COL21A1Q96P44 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
COL21A1Q96P44 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
COL21A1Q96P44 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
COL21A1Q96P44 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
COL21A1Q96P44 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
COL21A1Q96P44 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC18.93■□□□□ 0.62
COL21A1Q96P44 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC18.93■□□□□ 0.62
COL21A1Q96P44 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
COL21A1Q96P44 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
COL21A1Q96P44 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
COL21A1Q96P44 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
COL21A1Q96P44 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC18.92■□□□□ 0.62
COL21A1Q96P44 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
COL21A1Q96P44 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
COL21A1Q96P44 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
COL21A1Q96P44 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC18.92■□□□□ 0.62
COL21A1Q96P44 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
COL21A1Q96P44 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
COL21A1Q96P44 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC18.92■□□□□ 0.62
COL21A1Q96P44 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
COL21A1Q96P44 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC18.92■□□□□ 0.62
COL21A1Q96P44 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
COL21A1Q96P44 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
COL21A1Q96P44 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
COL21A1Q96P44 VMO1-204ENST00000441199 741 ntTSL 2 BASIC18.92■□□□□ 0.62
COL21A1Q96P44 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
COL21A1Q96P44 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
COL21A1Q96P44 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC18.92■□□□□ 0.62
COL21A1Q96P44 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
COL21A1Q96P44 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
COL21A1Q96P44 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
COL21A1Q96P44 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
COL21A1Q96P44 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
COL21A1Q96P44 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
COL21A1Q96P44 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
COL21A1Q96P44 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
COL21A1Q96P44 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
COL21A1Q96P44 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
COL21A1Q96P44 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
COL21A1Q96P44 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
COL21A1Q96P44 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC18.91■□□□□ 0.62
COL21A1Q96P44 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
COL21A1Q96P44 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
COL21A1Q96P44 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
COL21A1Q96P44 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
COL21A1Q96P44 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
COL21A1Q96P44 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC18.91■□□□□ 0.62
COL21A1Q96P44 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
COL21A1Q96P44 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
COL21A1Q96P44 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
COL21A1Q96P44 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC18.91■□□□□ 0.62
COL21A1Q96P44 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC18.91■□□□□ 0.62
COL21A1Q96P44 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC18.91■□□□□ 0.62
COL21A1Q96P44 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC18.91■□□□□ 0.62
COL21A1Q96P44 TK2-208ENST00000545043 1120 ntTSL 2 BASIC18.91■□□□□ 0.62
COL21A1Q96P44 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC18.91■□□□□ 0.62
COL21A1Q96P44 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC18.91■□□□□ 0.62
COL21A1Q96P44 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC18.91■□□□□ 0.62
COL21A1Q96P44 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
COL21A1Q96P44 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
COL21A1Q96P44 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC18.91■□□□□ 0.62
COL21A1Q96P44 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
COL21A1Q96P44 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
COL21A1Q96P44 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
COL21A1Q96P44 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC18.9■□□□□ 0.62
COL21A1Q96P44 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
COL21A1Q96P44 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
COL21A1Q96P44 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
COL21A1Q96P44 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
COL21A1Q96P44 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
COL21A1Q96P44 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC18.9■□□□□ 0.62
COL21A1Q96P44 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
COL21A1Q96P44 AF201337.1-201ENST00000520239 748 ntBASIC18.9■□□□□ 0.62
COL21A1Q96P44 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC18.9■□□□□ 0.62
COL21A1Q96P44 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC18.9■□□□□ 0.62
COL21A1Q96P44 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
COL21A1Q96P44 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC18.9■□□□□ 0.62
COL21A1Q96P44 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC18.9■□□□□ 0.62
COL21A1Q96P44 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms