Protein–RNA interactions for Protein: Q96MX0

CMTM3, CKLF-like MARVEL transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 182 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3Q96MX0 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CMTM3Q96MX0 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
CMTM3Q96MX0 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC17.24■□□□□ 0.35
CMTM3Q96MX0 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC17.24■□□□□ 0.35
CMTM3Q96MX0 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CMTM3Q96MX0 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CMTM3Q96MX0 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CMTM3Q96MX0 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CMTM3Q96MX0 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
CMTM3Q96MX0 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC17.24■□□□□ 0.35
CMTM3Q96MX0 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC17.24■□□□□ 0.35
CMTM3Q96MX0 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC17.24■□□□□ 0.35
CMTM3Q96MX0 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
CMTM3Q96MX0 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CMTM3Q96MX0 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CMTM3Q96MX0 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CMTM3Q96MX0 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
CMTM3Q96MX0 MOK-225ENST00000522867 1883 ntTSL 5 BASIC17.24■□□□□ 0.35
CMTM3Q96MX0 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CMTM3Q96MX0 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CMTM3Q96MX0 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CMTM3Q96MX0 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
CMTM3Q96MX0 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
CMTM3Q96MX0 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CMTM3Q96MX0 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC17.23■□□□□ 0.35
CMTM3Q96MX0 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
CMTM3Q96MX0 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CMTM3Q96MX0 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC17.23■□□□□ 0.35
CMTM3Q96MX0 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC17.23■□□□□ 0.35
CMTM3Q96MX0 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CMTM3Q96MX0 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CMTM3Q96MX0 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC17.23■□□□□ 0.35
CMTM3Q96MX0 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
CMTM3Q96MX0 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CMTM3Q96MX0 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
CMTM3Q96MX0 PTMA-205ENST00000410064 814 ntTSL 2 BASIC17.23■□□□□ 0.35
CMTM3Q96MX0 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC17.23■□□□□ 0.35
CMTM3Q96MX0 AC126544.1-201ENST00000580842 1059 ntBASIC17.23■□□□□ 0.35
CMTM3Q96MX0 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
CMTM3Q96MX0 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CMTM3Q96MX0 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CMTM3Q96MX0 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC17.23■□□□□ 0.35
CMTM3Q96MX0 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CMTM3Q96MX0 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CMTM3Q96MX0 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
CMTM3Q96MX0 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
CMTM3Q96MX0 TP73-202ENST00000354437 2140 ntTSL 5 BASIC17.23■□□□□ 0.35
CMTM3Q96MX0 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
CMTM3Q96MX0 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CMTM3Q96MX0 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC17.22■□□□□ 0.35
CMTM3Q96MX0 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC17.22■□□□□ 0.35
CMTM3Q96MX0 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CMTM3Q96MX0 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CMTM3Q96MX0 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CMTM3Q96MX0 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CMTM3Q96MX0 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CMTM3Q96MX0 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC17.22■□□□□ 0.35
CMTM3Q96MX0 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC17.22■□□□□ 0.35
CMTM3Q96MX0 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC17.22■□□□□ 0.35
CMTM3Q96MX0 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CMTM3Q96MX0 AC120498.10-201ENST00000621827 505 ntBASIC17.22■□□□□ 0.35
CMTM3Q96MX0 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC17.22■□□□□ 0.35
CMTM3Q96MX0 AL035685.1-201ENST00000636663 812 ntBASIC17.22■□□□□ 0.35
CMTM3Q96MX0 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CMTM3Q96MX0 ADK-206ENST00000541550 2222 ntTSL 2 BASIC17.22■□□□□ 0.35
CMTM3Q96MX0 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC17.22■□□□□ 0.35
CMTM3Q96MX0 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CMTM3Q96MX0 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
CMTM3Q96MX0 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
CMTM3Q96MX0 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC17.22■□□□□ 0.35
CMTM3Q96MX0 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
CMTM3Q96MX0 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CMTM3Q96MX0 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC17.21■□□□□ 0.35
CMTM3Q96MX0 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
CMTM3Q96MX0 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CMTM3Q96MX0 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CMTM3Q96MX0 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CMTM3Q96MX0 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
CMTM3Q96MX0 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CMTM3Q96MX0 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CMTM3Q96MX0 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
CMTM3Q96MX0 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
CMTM3Q96MX0 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CMTM3Q96MX0 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC17.21■□□□□ 0.35
CMTM3Q96MX0 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
CMTM3Q96MX0 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC17.21■□□□□ 0.35
CMTM3Q96MX0 OR2A1-AS1-204ENST00000470435 602 ntBASIC17.21■□□□□ 0.35
CMTM3Q96MX0 TRIR-202ENST00000588213 841 ntTSL 3 BASIC17.21■□□□□ 0.35
CMTM3Q96MX0 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
CMTM3Q96MX0 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
CMTM3Q96MX0 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CMTM3Q96MX0 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CMTM3Q96MX0 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC17.21■□□□□ 0.35
CMTM3Q96MX0 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CMTM3Q96MX0 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC17.21■□□□□ 0.35
CMTM3Q96MX0 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
CMTM3Q96MX0 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
CMTM3Q96MX0 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
CMTM3Q96MX0 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC17.21■□□□□ 0.34
CMTM3Q96MX0 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC17.21■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms