Protein–RNA interactions for Protein: Q96M42

LINC00479, Putative uncharacterized protein encoded by LINC00479, humanhuman

Predictions only

Length 142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00479Q96M42 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LINC00479Q96M42 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LINC00479Q96M42 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
LINC00479Q96M42 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
LINC00479Q96M42 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LINC00479Q96M42 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
LINC00479Q96M42 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
LINC00479Q96M42 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LINC00479Q96M42 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LINC00479Q96M42 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
LINC00479Q96M42 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
LINC00479Q96M42 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
LINC00479Q96M42 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
LINC00479Q96M42 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
LINC00479Q96M42 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LINC00479Q96M42 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LINC00479Q96M42 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LINC00479Q96M42 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LINC00479Q96M42 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
LINC00479Q96M42 MFF-208ENST00000409616 1247 ntTSL 5 BASIC15.3■□□□□ 0.04
LINC00479Q96M42 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC15.3■□□□□ 0.04
LINC00479Q96M42 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
LINC00479Q96M42 AC131281.2-201ENST00000520478 145 ntBASIC15.3■□□□□ 0.04
LINC00479Q96M42 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LINC00479Q96M42 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC15.3■□□□□ 0.04
LINC00479Q96M42 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC15.3■□□□□ 0.04
LINC00479Q96M42 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
LINC00479Q96M42 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LINC00479Q96M42 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LINC00479Q96M42 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
LINC00479Q96M42 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC15.29■□□□□ 0.04
LINC00479Q96M42 PTGES2-AS1-201ENST00000443493 2100 ntBASIC15.29■□□□□ 0.04
LINC00479Q96M42 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LINC00479Q96M42 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
LINC00479Q96M42 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
LINC00479Q96M42 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LINC00479Q96M42 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LINC00479Q96M42 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LINC00479Q96M42 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LINC00479Q96M42 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC15.29■□□□□ 0.04
LINC00479Q96M42 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LINC00479Q96M42 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
LINC00479Q96M42 TSPY26P-201ENST00000476365 1326 ntBASIC15.29■□□□□ 0.04
LINC00479Q96M42 UNC93B3-201ENST00000308076 687 ntBASIC15.29■□□□□ 0.04
LINC00479Q96M42 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LINC00479Q96M42 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC15.29■□□□□ 0.04
LINC00479Q96M42 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LINC00479Q96M42 AL356441.2-201ENST00000443009 864 ntBASIC15.29■□□□□ 0.04
LINC00479Q96M42 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC15.29■□□□□ 0.04
LINC00479Q96M42 AC008175.2-201ENST00000612840 297 ntBASIC15.29■□□□□ 0.04
LINC00479Q96M42 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LINC00479Q96M42 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
LINC00479Q96M42 AIRN-201ENST00000601203 4374 ntBASIC15.29■□□□□ 0.04
LINC00479Q96M42 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC15.29■□□□□ 0.04
LINC00479Q96M42 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LINC00479Q96M42 AC026471.1-201ENST00000564629 3026 ntBASIC15.29■□□□□ 0.04
LINC00479Q96M42 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC15.29■□□□□ 0.04
LINC00479Q96M42 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LINC00479Q96M42 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LINC00479Q96M42 AC116050.2-201ENST00000612102 1779 ntBASIC15.29■□□□□ 0.04
LINC00479Q96M42 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC15.29■□□□□ 0.04
LINC00479Q96M42 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
LINC00479Q96M42 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LINC00479Q96M42 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
LINC00479Q96M42 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC15.28■□□□□ 0.04
LINC00479Q96M42 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
LINC00479Q96M42 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC15.28■□□□□ 0.04
LINC00479Q96M42 BX119927.1-201ENST00000636596 1552 ntBASIC15.28■□□□□ 0.04
LINC00479Q96M42 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
LINC00479Q96M42 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LINC00479Q96M42 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC15.28■□□□□ 0.04
LINC00479Q96M42 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
LINC00479Q96M42 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
LINC00479Q96M42 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LINC00479Q96M42 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LINC00479Q96M42 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LINC00479Q96M42 POU5F1P4-201ENST00000413175 1085 ntBASIC15.28■□□□□ 0.04
LINC00479Q96M42 AC008764.7-201ENST00000593779 1081 ntBASIC15.28■□□□□ 0.04
LINC00479Q96M42 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LINC00479Q96M42 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC15.28■□□□□ 0.04
LINC00479Q96M42 Z82202.1-201ENST00000623446 1880 ntBASIC15.28■□□□□ 0.04
LINC00479Q96M42 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LINC00479Q96M42 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC15.28■□□□□ 0.04
LINC00479Q96M42 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
LINC00479Q96M42 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LINC00479Q96M42 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LINC00479Q96M42 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LINC00479Q96M42 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC15.28■□□□□ 0.04
LINC00479Q96M42 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LINC00479Q96M42 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LINC00479Q96M42 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LINC00479Q96M42 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LINC00479Q96M42 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LINC00479Q96M42 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
LINC00479Q96M42 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
LINC00479Q96M42 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC15.28■□□□□ 0.04
LINC00479Q96M42 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LINC00479Q96M42 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
LINC00479Q96M42 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC15.27■□□□□ 0.04
LINC00479Q96M42 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms