Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 NT5C-211ENST00000582170 653 ntTSL 3 BASIC21.71■■□□□ 1.07
SNX27Q96L92 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC21.71■■□□□ 1.07
SNX27Q96L92 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SNX27Q96L92 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
SNX27Q96L92 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC21.71■■□□□ 1.07
SNX27Q96L92 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SNX27Q96L92 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC21.71■■□□□ 1.07
SNX27Q96L92 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC21.71■■□□□ 1.07
SNX27Q96L92 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SNX27Q96L92 KRT8P20-201ENST00000423953 1409 ntBASIC21.71■■□□□ 1.07
SNX27Q96L92 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC21.71■■□□□ 1.07
SNX27Q96L92 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
SNX27Q96L92 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC21.7■■□□□ 1.06
SNX27Q96L92 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SNX27Q96L92 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
SNX27Q96L92 PEX7-202ENST00000367756 680 ntTSL 3 BASIC21.7■■□□□ 1.06
SNX27Q96L92 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
SNX27Q96L92 HLA-G-202ENST00000376815 851 ntBASIC21.7■■□□□ 1.06
SNX27Q96L92 HLA-G-203ENST00000376818 1127 ntBASIC21.7■■□□□ 1.06
SNX27Q96L92 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC21.7■■□□□ 1.06
SNX27Q96L92 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC21.7■■□□□ 1.06
SNX27Q96L92 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC21.7■■□□□ 1.06
SNX27Q96L92 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SNX27Q96L92 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC21.7■■□□□ 1.06
SNX27Q96L92 USP36-216ENST00000589424 970 ntTSL 5 BASIC21.7■■□□□ 1.06
SNX27Q96L92 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
SNX27Q96L92 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SNX27Q96L92 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SNX27Q96L92 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
SNX27Q96L92 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SNX27Q96L92 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SNX27Q96L92 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
SNX27Q96L92 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
SNX27Q96L92 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC21.69■■□□□ 1.06
SNX27Q96L92 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC21.69■■□□□ 1.06
SNX27Q96L92 AC124283.5-201ENST00000624661 1809 ntBASIC21.69■■□□□ 1.06
SNX27Q96L92 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
SNX27Q96L92 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SNX27Q96L92 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC21.69■■□□□ 1.06
SNX27Q96L92 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SNX27Q96L92 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC21.69■■□□□ 1.06
SNX27Q96L92 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC21.69■■□□□ 1.06
SNX27Q96L92 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC21.69■■□□□ 1.06
SNX27Q96L92 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SNX27Q96L92 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SNX27Q96L92 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC21.69■■□□□ 1.06
SNX27Q96L92 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC21.68■■□□□ 1.06
SNX27Q96L92 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SNX27Q96L92 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
SNX27Q96L92 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC21.68■■□□□ 1.06
SNX27Q96L92 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
SNX27Q96L92 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC21.68■■□□□ 1.06
SNX27Q96L92 TK2-213ENST00000563369 882 ntTSL 5 BASIC21.68■■□□□ 1.06
SNX27Q96L92 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC21.68■■□□□ 1.06
SNX27Q96L92 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC21.68■■□□□ 1.06
SNX27Q96L92 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC21.68■■□□□ 1.06
SNX27Q96L92 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
SNX27Q96L92 KRT8P17-201ENST00000453110 1448 ntBASIC21.68■■□□□ 1.06
SNX27Q96L92 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SNX27Q96L92 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SNX27Q96L92 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC21.68■■□□□ 1.06
SNX27Q96L92 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC21.68■■□□□ 1.06
SNX27Q96L92 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SNX27Q96L92 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
SNX27Q96L92 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
SNX27Q96L92 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SNX27Q96L92 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SNX27Q96L92 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SNX27Q96L92 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC21.67■■□□□ 1.06
SNX27Q96L92 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
SNX27Q96L92 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SNX27Q96L92 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SNX27Q96L92 SERF2-207ENST00000409614 582 ntTSL 2 BASIC21.67■■□□□ 1.06
SNX27Q96L92 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
SNX27Q96L92 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC21.67■■□□□ 1.06
SNX27Q96L92 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SNX27Q96L92 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SNX27Q96L92 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SNX27Q96L92 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
SNX27Q96L92 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
SNX27Q96L92 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SNX27Q96L92 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SNX27Q96L92 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC21.66■■□□□ 1.06
SNX27Q96L92 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC21.66■■□□□ 1.06
SNX27Q96L92 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
SNX27Q96L92 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
SNX27Q96L92 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC21.66■■□□□ 1.06
SNX27Q96L92 RHOD-202ENST00000532559 538 ntTSL 3 BASIC21.66■■□□□ 1.06
SNX27Q96L92 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC21.66■■□□□ 1.06
SNX27Q96L92 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC21.66■■□□□ 1.06
SNX27Q96L92 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
SNX27Q96L92 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC21.66■■□□□ 1.06
SNX27Q96L92 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
SNX27Q96L92 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC21.66■■□□□ 1.06
SNX27Q96L92 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC21.66■■□□□ 1.06
SNX27Q96L92 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
SNX27Q96L92 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
SNX27Q96L92 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC21.66■■□□□ 1.06
SNX27Q96L92 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
SNX27Q96L92 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms