Protein–RNA interactions for Protein: Q96K30

RITA1, RBPJ-interacting and tubulin-associated protein 1, humanhuman

Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RITA1Q96K30 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC16.13■□□□□ 0.17
RITA1Q96K30 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
RITA1Q96K30 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RITA1Q96K30 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RITA1Q96K30 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
RITA1Q96K30 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RITA1Q96K30 AL691432.2-201ENST00000607222 2038 ntBASIC16.13■□□□□ 0.17
RITA1Q96K30 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
RITA1Q96K30 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC16.13■□□□□ 0.17
RITA1Q96K30 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC16.13■□□□□ 0.17
RITA1Q96K30 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC16.13■□□□□ 0.17
RITA1Q96K30 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC16.13■□□□□ 0.17
RITA1Q96K30 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC16.13■□□□□ 0.17
RITA1Q96K30 GAMT-205ENST00000640762 751 ntTSL 5 BASIC16.13■□□□□ 0.17
RITA1Q96K30 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC16.13■□□□□ 0.17
RITA1Q96K30 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
RITA1Q96K30 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
RITA1Q96K30 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
RITA1Q96K30 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
RITA1Q96K30 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RITA1Q96K30 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
RITA1Q96K30 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
RITA1Q96K30 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC16.12■□□□□ 0.17
RITA1Q96K30 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC16.12■□□□□ 0.17
RITA1Q96K30 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
RITA1Q96K30 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RITA1Q96K30 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC16.12■□□□□ 0.17
RITA1Q96K30 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RITA1Q96K30 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RITA1Q96K30 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RITA1Q96K30 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC16.12■□□□□ 0.17
RITA1Q96K30 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC16.12■□□□□ 0.17
RITA1Q96K30 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC16.12■□□□□ 0.17
RITA1Q96K30 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC16.12■□□□□ 0.17
RITA1Q96K30 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RITA1Q96K30 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
RITA1Q96K30 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RITA1Q96K30 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC16.12■□□□□ 0.17
RITA1Q96K30 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC16.12■□□□□ 0.17
RITA1Q96K30 NXN-202ENST00000537628 1340 ntTSL 3 BASIC16.12■□□□□ 0.17
RITA1Q96K30 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RITA1Q96K30 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
RITA1Q96K30 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
RITA1Q96K30 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC16.12■□□□□ 0.17
RITA1Q96K30 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC16.12■□□□□ 0.17
RITA1Q96K30 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RITA1Q96K30 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
RITA1Q96K30 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC16.11■□□□□ 0.17
RITA1Q96K30 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC16.11■□□□□ 0.17
RITA1Q96K30 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
RITA1Q96K30 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RITA1Q96K30 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
RITA1Q96K30 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
RITA1Q96K30 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RITA1Q96K30 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC16.11■□□□□ 0.17
RITA1Q96K30 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC16.11■□□□□ 0.17
RITA1Q96K30 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RITA1Q96K30 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
RITA1Q96K30 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC16.11■□□□□ 0.17
RITA1Q96K30 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
RITA1Q96K30 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC16.11■□□□□ 0.17
RITA1Q96K30 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC16.11■□□□□ 0.17
RITA1Q96K30 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
RITA1Q96K30 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RITA1Q96K30 AL138781.1-201ENST00000566567 1274 ntBASIC16.11■□□□□ 0.17
RITA1Q96K30 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
RITA1Q96K30 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC16.11■□□□□ 0.17
RITA1Q96K30 BRWD1-AS2-201ENST00000603064 1028 ntBASIC16.11■□□□□ 0.17
RITA1Q96K30 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RITA1Q96K30 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RITA1Q96K30 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RITA1Q96K30 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
RITA1Q96K30 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
RITA1Q96K30 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
RITA1Q96K30 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
RITA1Q96K30 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RITA1Q96K30 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
RITA1Q96K30 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RITA1Q96K30 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RITA1Q96K30 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RITA1Q96K30 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RITA1Q96K30 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RITA1Q96K30 BX119927.1-201ENST00000636596 1552 ntBASIC16.1■□□□□ 0.17
RITA1Q96K30 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RITA1Q96K30 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
RITA1Q96K30 SLC29A4P1-201ENST00000398760 971 ntBASIC16.1■□□□□ 0.17
RITA1Q96K30 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC16.1■□□□□ 0.17
RITA1Q96K30 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
RITA1Q96K30 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC16.1■□□□□ 0.17
RITA1Q96K30 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
RITA1Q96K30 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC16.1■□□□□ 0.17
RITA1Q96K30 AL109923.1-201ENST00000618799 583 ntBASIC16.1■□□□□ 0.17
RITA1Q96K30 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RITA1Q96K30 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RITA1Q96K30 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
RITA1Q96K30 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
RITA1Q96K30 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC16.1■□□□□ 0.17
RITA1Q96K30 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
RITA1Q96K30 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RITA1Q96K30 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms