Protein–RNA interactions for Protein: Q96J02

ITCH, E3 ubiquitin-protein ligase Itchy homolog, humanhuman

Predictions only

Length 903 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITCHQ96J02 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
ITCHQ96J02 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
ITCHQ96J02 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
ITCHQ96J02 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC19.09■□□□□ 0.65
ITCHQ96J02 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ITCHQ96J02 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ITCHQ96J02 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
ITCHQ96J02 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
ITCHQ96J02 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
ITCHQ96J02 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
ITCHQ96J02 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
ITCHQ96J02 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
ITCHQ96J02 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC19.08■□□□□ 0.65
ITCHQ96J02 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
ITCHQ96J02 CD37-204ENST00000535669 1674 ntTSL 2 BASIC19.08■□□□□ 0.65
ITCHQ96J02 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC19.08■□□□□ 0.65
ITCHQ96J02 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
ITCHQ96J02 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
ITCHQ96J02 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC19.08■□□□□ 0.65
ITCHQ96J02 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
ITCHQ96J02 MIR638-201ENST00000385237 100 ntBASIC19.08■□□□□ 0.64
ITCHQ96J02 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC19.08■□□□□ 0.64
ITCHQ96J02 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
ITCHQ96J02 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
ITCHQ96J02 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
ITCHQ96J02 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.64
ITCHQ96J02 AL158211.5-201ENST00000623583 2518 ntBASIC19.08■□□□□ 0.64
ITCHQ96J02 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
ITCHQ96J02 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
ITCHQ96J02 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
ITCHQ96J02 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ITCHQ96J02 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
ITCHQ96J02 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
ITCHQ96J02 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
ITCHQ96J02 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ITCHQ96J02 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC19.07■□□□□ 0.64
ITCHQ96J02 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
ITCHQ96J02 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
ITCHQ96J02 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ITCHQ96J02 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ITCHQ96J02 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ITCHQ96J02 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
ITCHQ96J02 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC19.07■□□□□ 0.64
ITCHQ96J02 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC19.07■□□□□ 0.64
ITCHQ96J02 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC19.07■□□□□ 0.64
ITCHQ96J02 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC19.07■□□□□ 0.64
ITCHQ96J02 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC19.07■□□□□ 0.64
ITCHQ96J02 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ITCHQ96J02 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
ITCHQ96J02 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ITCHQ96J02 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
ITCHQ96J02 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ITCHQ96J02 AL020996.1-203ENST00000536896 2307 ntBASIC19.07■□□□□ 0.64
ITCHQ96J02 AC116562.4-201ENST00000641316 2276 ntBASIC19.07■□□□□ 0.64
ITCHQ96J02 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
ITCHQ96J02 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
ITCHQ96J02 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
ITCHQ96J02 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ITCHQ96J02 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
ITCHQ96J02 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC19.06■□□□□ 0.64
ITCHQ96J02 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ITCHQ96J02 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ITCHQ96J02 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
ITCHQ96J02 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC19.06■□□□□ 0.64
ITCHQ96J02 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC19.06■□□□□ 0.64
ITCHQ96J02 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
ITCHQ96J02 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
ITCHQ96J02 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
ITCHQ96J02 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC19.06■□□□□ 0.64
ITCHQ96J02 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
ITCHQ96J02 GALNS-213ENST00000569433 723 ntTSL 3 BASIC19.06■□□□□ 0.64
ITCHQ96J02 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC19.06■□□□□ 0.64
ITCHQ96J02 AL356652.1-201ENST00000615962 565 ntBASIC19.06■□□□□ 0.64
ITCHQ96J02 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC19.06■□□□□ 0.64
ITCHQ96J02 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ITCHQ96J02 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
ITCHQ96J02 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC19.06■□□□□ 0.64
ITCHQ96J02 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC19.06■□□□□ 0.64
ITCHQ96J02 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
ITCHQ96J02 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
ITCHQ96J02 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC19.06■□□□□ 0.64
ITCHQ96J02 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC19.06■□□□□ 0.64
ITCHQ96J02 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC19.06■□□□□ 0.64
ITCHQ96J02 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
ITCHQ96J02 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ITCHQ96J02 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ITCHQ96J02 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
ITCHQ96J02 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC19.05■□□□□ 0.64
ITCHQ96J02 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC19.05■□□□□ 0.64
ITCHQ96J02 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
ITCHQ96J02 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
ITCHQ96J02 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
ITCHQ96J02 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
ITCHQ96J02 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC19.05■□□□□ 0.64
ITCHQ96J02 VMO1-204ENST00000441199 741 ntTSL 2 BASIC19.05■□□□□ 0.64
ITCHQ96J02 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC19.05■□□□□ 0.64
ITCHQ96J02 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC19.05■□□□□ 0.64
ITCHQ96J02 UBE2DNL-204ENST00000602536 740 ntBASIC19.05■□□□□ 0.64
ITCHQ96J02 TFG-210ENST00000620299 1289 ntTSL 5 BASIC19.05■□□□□ 0.64
ITCHQ96J02 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC19.05■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms