Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
IFT43Q96FT9 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC20.62■□□□□ 0.89
IFT43Q96FT9 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC20.62■□□□□ 0.89
IFT43Q96FT9 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
IFT43Q96FT9 AC010980.2-201ENST00000587099 1412 ntBASIC20.61■□□□□ 0.89
IFT43Q96FT9 ISCU-212ENST00000547005 795 ntTSL 3 BASIC20.61■□□□□ 0.89
IFT43Q96FT9 MIR4651-201ENST00000582622 73 ntBASIC20.61■□□□□ 0.89
IFT43Q96FT9 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC20.61■□□□□ 0.89
IFT43Q96FT9 AC100791.3-201ENST00000617619 330 ntBASIC20.61■□□□□ 0.89
IFT43Q96FT9 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC20.61■□□□□ 0.89
IFT43Q96FT9 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
IFT43Q96FT9 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
IFT43Q96FT9 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC20.61■□□□□ 0.89
IFT43Q96FT9 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
IFT43Q96FT9 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
IFT43Q96FT9 AL020996.1-203ENST00000536896 2307 ntBASIC20.6■□□□□ 0.89
IFT43Q96FT9 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC20.6■□□□□ 0.89
IFT43Q96FT9 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC20.6■□□□□ 0.89
IFT43Q96FT9 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
IFT43Q96FT9 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
IFT43Q96FT9 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC20.6■□□□□ 0.89
IFT43Q96FT9 MCRIP2P1-201ENST00000394346 511 ntBASIC20.6■□□□□ 0.89
IFT43Q96FT9 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC20.6■□□□□ 0.89
IFT43Q96FT9 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC20.6■□□□□ 0.89
IFT43Q96FT9 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
IFT43Q96FT9 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
IFT43Q96FT9 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
IFT43Q96FT9 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
IFT43Q96FT9 AC087633.2-202ENST00000565166 1439 ntBASIC20.6■□□□□ 0.89
IFT43Q96FT9 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
IFT43Q96FT9 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
IFT43Q96FT9 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC20.6■□□□□ 0.89
IFT43Q96FT9 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
IFT43Q96FT9 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC20.59■□□□□ 0.89
IFT43Q96FT9 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC20.59■□□□□ 0.89
IFT43Q96FT9 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC20.59■□□□□ 0.89
IFT43Q96FT9 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
IFT43Q96FT9 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC20.59■□□□□ 0.89
IFT43Q96FT9 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
IFT43Q96FT9 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC20.59■□□□□ 0.89
IFT43Q96FT9 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
IFT43Q96FT9 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
IFT43Q96FT9 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
IFT43Q96FT9 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC20.59■□□□□ 0.89
IFT43Q96FT9 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC20.59■□□□□ 0.89
IFT43Q96FT9 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC20.59■□□□□ 0.89
IFT43Q96FT9 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC20.59■□□□□ 0.89
IFT43Q96FT9 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC20.59■□□□□ 0.89
IFT43Q96FT9 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC20.59■□□□□ 0.89
IFT43Q96FT9 AC097658.1-201ENST00000475555 843 ntBASIC20.59■□□□□ 0.89
IFT43Q96FT9 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC20.59■□□□□ 0.89
IFT43Q96FT9 MYC-209ENST00000641252 345 ntBASIC20.59■□□□□ 0.89
IFT43Q96FT9 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
IFT43Q96FT9 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
IFT43Q96FT9 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
IFT43Q96FT9 AIRN-201ENST00000601203 4374 ntBASIC20.59■□□□□ 0.89
IFT43Q96FT9 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
IFT43Q96FT9 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
IFT43Q96FT9 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
IFT43Q96FT9 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
IFT43Q96FT9 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
IFT43Q96FT9 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
IFT43Q96FT9 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
IFT43Q96FT9 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
IFT43Q96FT9 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
IFT43Q96FT9 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC20.58■□□□□ 0.89
IFT43Q96FT9 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC20.58■□□□□ 0.89
IFT43Q96FT9 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC20.58■□□□□ 0.89
IFT43Q96FT9 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
IFT43Q96FT9 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
IFT43Q96FT9 POU5F1P3-201ENST00000428824 1078 ntBASIC20.58■□□□□ 0.89
IFT43Q96FT9 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
IFT43Q96FT9 AL356652.1-201ENST00000615962 565 ntBASIC20.58■□□□□ 0.89
IFT43Q96FT9 KRT8P36-201ENST00000489121 1440 ntBASIC20.58■□□□□ 0.88
IFT43Q96FT9 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
IFT43Q96FT9 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC20.58■□□□□ 0.88
IFT43Q96FT9 AC073314.1-201ENST00000568729 2216 ntBASIC20.58■□□□□ 0.88
IFT43Q96FT9 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
IFT43Q96FT9 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
IFT43Q96FT9 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
IFT43Q96FT9 AC092720.2-201ENST00000602388 1665 ntBASIC20.58■□□□□ 0.88
IFT43Q96FT9 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
IFT43Q96FT9 MCC-208ENST00000514701 2855 ntTSL 2 BASIC20.57■□□□□ 0.88
IFT43Q96FT9 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
IFT43Q96FT9 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC20.57■□□□□ 0.88
IFT43Q96FT9 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC20.57■□□□□ 0.88
IFT43Q96FT9 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
IFT43Q96FT9 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
IFT43Q96FT9 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
IFT43Q96FT9 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
IFT43Q96FT9 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC20.57■□□□□ 0.88
IFT43Q96FT9 RHEB-204ENST00000472642 900 ntTSL 3 BASIC20.57■□□□□ 0.88
IFT43Q96FT9 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC20.57■□□□□ 0.88
IFT43Q96FT9 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
IFT43Q96FT9 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC20.57■□□□□ 0.88
IFT43Q96FT9 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC20.57■□□□□ 0.88
IFT43Q96FT9 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
IFT43Q96FT9 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
IFT43Q96FT9 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
IFT43Q96FT9 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 69.5 ms