Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
PTP4A1Q93096 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
PTP4A1Q93096 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
PTP4A1Q93096 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.47
PTP4A1Q93096 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC18.01■□□□□ 0.47
PTP4A1Q93096 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC18.01■□□□□ 0.47
PTP4A1Q93096 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PTP4A1Q93096 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC18.01■□□□□ 0.47
PTP4A1Q93096 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
PTP4A1Q93096 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
PTP4A1Q93096 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PTP4A1Q93096 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PTP4A1Q93096 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC18.01■□□□□ 0.47
PTP4A1Q93096 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PTP4A1Q93096 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PTP4A1Q93096 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC18.01■□□□□ 0.47
PTP4A1Q93096 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC18.01■□□□□ 0.47
PTP4A1Q93096 CDV3P1-201ENST00000471403 739 ntBASIC18.01■□□□□ 0.47
PTP4A1Q93096 ANKRD20A6P-201ENST00000618763 204 ntBASIC18.01■□□□□ 0.47
PTP4A1Q93096 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PTP4A1Q93096 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PTP4A1Q93096 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PTP4A1Q93096 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC18.01■□□□□ 0.47
PTP4A1Q93096 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PTP4A1Q93096 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC18.01■□□□□ 0.47
PTP4A1Q93096 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
PTP4A1Q93096 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC18.01■□□□□ 0.47
PTP4A1Q93096 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
PTP4A1Q93096 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
PTP4A1Q93096 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PTP4A1Q93096 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PTP4A1Q93096 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC18■□□□□ 0.47
PTP4A1Q93096 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PTP4A1Q93096 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PTP4A1Q93096 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC18■□□□□ 0.47
PTP4A1Q93096 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC18■□□□□ 0.47
PTP4A1Q93096 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PTP4A1Q93096 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PTP4A1Q93096 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC18■□□□□ 0.47
PTP4A1Q93096 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC18■□□□□ 0.47
PTP4A1Q93096 VMO1-204ENST00000441199 741 ntTSL 2 BASIC18■□□□□ 0.47
PTP4A1Q93096 AL162430.1-201ENST00000480705 870 ntBASIC18■□□□□ 0.47
PTP4A1Q93096 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC18■□□□□ 0.47
PTP4A1Q93096 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC18■□□□□ 0.47
PTP4A1Q93096 KRT18P61-201ENST00000585825 1298 ntBASIC18■□□□□ 0.47
PTP4A1Q93096 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC18■□□□□ 0.47
PTP4A1Q93096 TFG-210ENST00000620299 1289 ntTSL 5 BASIC18■□□□□ 0.47
PTP4A1Q93096 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC18■□□□□ 0.47
PTP4A1Q93096 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PTP4A1Q93096 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC18■□□□□ 0.47
PTP4A1Q93096 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC18■□□□□ 0.47
PTP4A1Q93096 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC18■□□□□ 0.47
PTP4A1Q93096 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PTP4A1Q93096 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC18■□□□□ 0.47
PTP4A1Q93096 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PTP4A1Q93096 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PTP4A1Q93096 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PTP4A1Q93096 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
PTP4A1Q93096 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
PTP4A1Q93096 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PTP4A1Q93096 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
PTP4A1Q93096 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PTP4A1Q93096 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PTP4A1Q93096 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC17.99■□□□□ 0.47
PTP4A1Q93096 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
PTP4A1Q93096 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC17.99■□□□□ 0.47
PTP4A1Q93096 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
PTP4A1Q93096 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
PTP4A1Q93096 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
PTP4A1Q93096 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
PTP4A1Q93096 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC17.99■□□□□ 0.47
PTP4A1Q93096 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC17.99■□□□□ 0.47
PTP4A1Q93096 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC17.99■□□□□ 0.47
PTP4A1Q93096 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PTP4A1Q93096 POLI-202ENST00000406285 2030 ntTSL 2 BASIC17.99■□□□□ 0.47
PTP4A1Q93096 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
PTP4A1Q93096 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
PTP4A1Q93096 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
PTP4A1Q93096 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PTP4A1Q93096 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC17.99■□□□□ 0.47
PTP4A1Q93096 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
PTP4A1Q93096 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
PTP4A1Q93096 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
PTP4A1Q93096 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PTP4A1Q93096 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PTP4A1Q93096 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
PTP4A1Q93096 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PTP4A1Q93096 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PTP4A1Q93096 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PTP4A1Q93096 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
PTP4A1Q93096 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC17.98■□□□□ 0.47
PTP4A1Q93096 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PTP4A1Q93096 AC018445.3-201ENST00000624177 1945 ntBASIC17.98■□□□□ 0.47
PTP4A1Q93096 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC17.98■□□□□ 0.47
PTP4A1Q93096 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
PTP4A1Q93096 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PTP4A1Q93096 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PTP4A1Q93096 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
PTP4A1Q93096 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PTP4A1Q93096 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC17.98■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms