Protein–RNA interactions for Protein: Q8NDA2

HMCN2, Hemicentin-2, humanhuman

Predictions only

Length 5,059 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN2Q8NDA2 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
HMCN2Q8NDA2 TSPY18P-201ENST00000441642 509 ntBASIC11.35□□□□□ -0.59
HMCN2Q8NDA2 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC11.35□□□□□ -0.59
HMCN2Q8NDA2 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
HMCN2Q8NDA2 AC010653.2-201ENST00000623505 997 ntBASIC11.35□□□□□ -0.59
HMCN2Q8NDA2 LTK-203ENST00000453182 2412 ntTSL 2 BASIC11.35□□□□□ -0.59
HMCN2Q8NDA2 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
HMCN2Q8NDA2 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
HMCN2Q8NDA2 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
HMCN2Q8NDA2 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
HMCN2Q8NDA2 HIST1H2APS4-201ENST00000362070 348 ntBASIC11.35□□□□□ -0.59
HMCN2Q8NDA2 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC11.35□□□□□ -0.59
HMCN2Q8NDA2 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
HMCN2Q8NDA2 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC11.35□□□□□ -0.59
HMCN2Q8NDA2 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
HMCN2Q8NDA2 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
HMCN2Q8NDA2 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC11.34□□□□□ -0.59
HMCN2Q8NDA2 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
HMCN2Q8NDA2 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC11.34□□□□□ -0.59
HMCN2Q8NDA2 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC11.34□□□□□ -0.59
HMCN2Q8NDA2 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC11.34□□□□□ -0.59
HMCN2Q8NDA2 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC11.34□□□□□ -0.59
HMCN2Q8NDA2 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
HMCN2Q8NDA2 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
HMCN2Q8NDA2 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC11.34□□□□□ -0.59
HMCN2Q8NDA2 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
HMCN2Q8NDA2 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC11.34□□□□□ -0.59
HMCN2Q8NDA2 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
HMCN2Q8NDA2 AC004870.1-201ENST00000315132 882 ntBASIC11.34□□□□□ -0.59
HMCN2Q8NDA2 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
HMCN2Q8NDA2 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
HMCN2Q8NDA2 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
HMCN2Q8NDA2 KSR1P1-201ENST00000446298 240 ntBASIC11.34□□□□□ -0.59
HMCN2Q8NDA2 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
HMCN2Q8NDA2 AC079776.4-201ENST00000511039 504 ntBASIC11.34□□□□□ -0.59
HMCN2Q8NDA2 CALM3-211ENST00000598871 561 ntTSL 4 BASIC11.34□□□□□ -0.59
HMCN2Q8NDA2 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
HMCN2Q8NDA2 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
HMCN2Q8NDA2 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
HMCN2Q8NDA2 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
HMCN2Q8NDA2 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC11.34□□□□□ -0.59
HMCN2Q8NDA2 AC097488.1-201ENST00000507834 756 ntBASIC11.34□□□□□ -0.59
HMCN2Q8NDA2 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC11.34□□□□□ -0.59
HMCN2Q8NDA2 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC11.33□□□□□ -0.59
HMCN2Q8NDA2 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
HMCN2Q8NDA2 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC11.33□□□□□ -0.59
HMCN2Q8NDA2 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
HMCN2Q8NDA2 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
HMCN2Q8NDA2 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
HMCN2Q8NDA2 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC11.33□□□□□ -0.6
HMCN2Q8NDA2 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC11.33□□□□□ -0.6
HMCN2Q8NDA2 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC11.33□□□□□ -0.6
HMCN2Q8NDA2 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC11.33□□□□□ -0.6
HMCN2Q8NDA2 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
HMCN2Q8NDA2 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
HMCN2Q8NDA2 C11orf96-202ENST00000528572 1834 ntBASIC11.33□□□□□ -0.6
HMCN2Q8NDA2 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC11.33□□□□□ -0.6
HMCN2Q8NDA2 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC11.33□□□□□ -0.6
HMCN2Q8NDA2 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
HMCN2Q8NDA2 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
HMCN2Q8NDA2 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
HMCN2Q8NDA2 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC11.33□□□□□ -0.6
HMCN2Q8NDA2 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
HMCN2Q8NDA2 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC11.33□□□□□ -0.6
HMCN2Q8NDA2 AC011506.1-201ENST00000474329 610 ntBASIC11.33□□□□□ -0.6
HMCN2Q8NDA2 AC116562.4-202ENST00000641738 218 ntBASIC11.33□□□□□ -0.6
HMCN2Q8NDA2 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
HMCN2Q8NDA2 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC11.33□□□□□ -0.6
HMCN2Q8NDA2 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
HMCN2Q8NDA2 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
HMCN2Q8NDA2 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
HMCN2Q8NDA2 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC11.33□□□□□ -0.6
HMCN2Q8NDA2 AC004980.1-204ENST00000429707 299 ntBASIC11.33□□□□□ -0.6
HMCN2Q8NDA2 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC11.33□□□□□ -0.6
HMCN2Q8NDA2 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC11.33□□□□□ -0.6
HMCN2Q8NDA2 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC11.33□□□□□ -0.6
HMCN2Q8NDA2 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC11.33□□□□□ -0.6
HMCN2Q8NDA2 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC11.33□□□□□ -0.6
HMCN2Q8NDA2 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
HMCN2Q8NDA2 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC11.33□□□□□ -0.6
HMCN2Q8NDA2 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC11.33□□□□□ -0.6
HMCN2Q8NDA2 AC112497.1-201ENST00000624824 639 ntBASIC11.33□□□□□ -0.6
HMCN2Q8NDA2 IL9RP2-201ENST00000423948 1312 ntBASIC11.32□□□□□ -0.6
HMCN2Q8NDA2 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
HMCN2Q8NDA2 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC11.32□□□□□ -0.6
HMCN2Q8NDA2 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC11.32□□□□□ -0.6
HMCN2Q8NDA2 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
HMCN2Q8NDA2 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
HMCN2Q8NDA2 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
HMCN2Q8NDA2 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
HMCN2Q8NDA2 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
HMCN2Q8NDA2 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
HMCN2Q8NDA2 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
HMCN2Q8NDA2 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
HMCN2Q8NDA2 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
HMCN2Q8NDA2 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC11.32□□□□□ -0.6
HMCN2Q8NDA2 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC11.32□□□□□ -0.6
HMCN2Q8NDA2 VPS51-217ENST00000639871 243 ntTSL 5 BASIC11.32□□□□□ -0.6
HMCN2Q8NDA2 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
HMCN2Q8NDA2 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC11.32□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms