Protein–RNA interactions for Protein: Q8IYJ1

CPNE9, Copine-9, humanhuman

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9Q8IYJ1 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC19.87■□□□□ 0.77
CPNE9Q8IYJ1 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CPNE9Q8IYJ1 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CPNE9Q8IYJ1 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
CPNE9Q8IYJ1 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CPNE9Q8IYJ1 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
CPNE9Q8IYJ1 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
CPNE9Q8IYJ1 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CPNE9Q8IYJ1 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CPNE9Q8IYJ1 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CPNE9Q8IYJ1 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CPNE9Q8IYJ1 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CPNE9Q8IYJ1 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC19.86■□□□□ 0.77
CPNE9Q8IYJ1 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CPNE9Q8IYJ1 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CPNE9Q8IYJ1 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC19.86■□□□□ 0.77
CPNE9Q8IYJ1 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CPNE9Q8IYJ1 H19-201ENST00000411754 1788 ntTSL 5 BASIC19.86■□□□□ 0.77
CPNE9Q8IYJ1 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC19.86■□□□□ 0.77
CPNE9Q8IYJ1 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CPNE9Q8IYJ1 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CPNE9Q8IYJ1 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC19.86■□□□□ 0.77
CPNE9Q8IYJ1 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CPNE9Q8IYJ1 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.86■□□□□ 0.77
CPNE9Q8IYJ1 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.86■□□□□ 0.77
CPNE9Q8IYJ1 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CPNE9Q8IYJ1 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC19.86■□□□□ 0.77
CPNE9Q8IYJ1 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CPNE9Q8IYJ1 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CPNE9Q8IYJ1 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CPNE9Q8IYJ1 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CPNE9Q8IYJ1 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CPNE9Q8IYJ1 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CPNE9Q8IYJ1 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CPNE9Q8IYJ1 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CPNE9Q8IYJ1 MIR663A-201ENST00000385250 93 ntBASIC19.85■□□□□ 0.77
CPNE9Q8IYJ1 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC19.85■□□□□ 0.77
CPNE9Q8IYJ1 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC19.85■□□□□ 0.77
CPNE9Q8IYJ1 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CPNE9Q8IYJ1 AC026185.1-201ENST00000445748 174 ntBASIC19.85■□□□□ 0.77
CPNE9Q8IYJ1 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CPNE9Q8IYJ1 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC19.85■□□□□ 0.77
CPNE9Q8IYJ1 RAP2CP1-201ENST00000605103 478 ntBASIC19.85■□□□□ 0.77
CPNE9Q8IYJ1 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CPNE9Q8IYJ1 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CPNE9Q8IYJ1 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CPNE9Q8IYJ1 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CPNE9Q8IYJ1 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
CPNE9Q8IYJ1 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CPNE9Q8IYJ1 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC19.84■□□□□ 0.77
CPNE9Q8IYJ1 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CPNE9Q8IYJ1 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC19.84■□□□□ 0.77
CPNE9Q8IYJ1 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CPNE9Q8IYJ1 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CPNE9Q8IYJ1 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC19.84■□□□□ 0.77
CPNE9Q8IYJ1 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CPNE9Q8IYJ1 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
CPNE9Q8IYJ1 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CPNE9Q8IYJ1 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CPNE9Q8IYJ1 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CPNE9Q8IYJ1 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CPNE9Q8IYJ1 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CPNE9Q8IYJ1 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CPNE9Q8IYJ1 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC19.83■□□□□ 0.77
CPNE9Q8IYJ1 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CPNE9Q8IYJ1 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CPNE9Q8IYJ1 TCF3P1-201ENST00000423021 1937 ntBASIC19.83■□□□□ 0.77
CPNE9Q8IYJ1 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
CPNE9Q8IYJ1 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CPNE9Q8IYJ1 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC19.83■□□□□ 0.77
CPNE9Q8IYJ1 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC19.83■□□□□ 0.77
CPNE9Q8IYJ1 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC19.83■□□□□ 0.77
CPNE9Q8IYJ1 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC19.83■□□□□ 0.77
CPNE9Q8IYJ1 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC19.83■□□□□ 0.77
CPNE9Q8IYJ1 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
CPNE9Q8IYJ1 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC19.83■□□□□ 0.76
CPNE9Q8IYJ1 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC19.83■□□□□ 0.76
CPNE9Q8IYJ1 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CPNE9Q8IYJ1 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC19.83■□□□□ 0.76
CPNE9Q8IYJ1 AFG3L1P-217ENST00000557444 2447 ntBASIC19.83■□□□□ 0.76
CPNE9Q8IYJ1 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC19.83■□□□□ 0.76
CPNE9Q8IYJ1 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CPNE9Q8IYJ1 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
CPNE9Q8IYJ1 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CPNE9Q8IYJ1 KRT17P1-201ENST00000399211 1546 ntBASIC19.82■□□□□ 0.76
CPNE9Q8IYJ1 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CPNE9Q8IYJ1 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC19.82■□□□□ 0.76
CPNE9Q8IYJ1 AL512625.2-201ENST00000417533 625 ntBASIC19.82■□□□□ 0.76
CPNE9Q8IYJ1 CROCCP5-201ENST00000436658 830 ntBASIC19.82■□□□□ 0.76
CPNE9Q8IYJ1 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CPNE9Q8IYJ1 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC19.82■□□□□ 0.76
CPNE9Q8IYJ1 AC133552.2-202ENST00000575694 574 ntBASIC19.82■□□□□ 0.76
CPNE9Q8IYJ1 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CPNE9Q8IYJ1 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC19.82■□□□□ 0.76
CPNE9Q8IYJ1 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CPNE9Q8IYJ1 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CPNE9Q8IYJ1 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC19.82■□□□□ 0.76
CPNE9Q8IYJ1 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
CPNE9Q8IYJ1 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC19.81■□□□□ 0.76
CPNE9Q8IYJ1 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC19.81■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 14.7 ms