Protein–RNA interactions for Protein: Q8IY21

DDX60, Probable ATP-dependent RNA helicase DDX60, humanhuman

Known RBP Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX60Q8IY21 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
DDX60Q8IY21 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
DDX60Q8IY21 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
DDX60Q8IY21 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC24.98■■□□□ 1.59
DDX60Q8IY21 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
DDX60Q8IY21 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC24.98■■□□□ 1.59
DDX60Q8IY21 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC24.98■■□□□ 1.59
DDX60Q8IY21 F2R-202ENST00000505600 442 ntTSL 2 BASIC24.98■■□□□ 1.59
DDX60Q8IY21 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC24.97■■□□□ 1.59
DDX60Q8IY21 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
DDX60Q8IY21 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
DDX60Q8IY21 KRT17P2-201ENST00000300992 1314 ntBASIC24.97■■□□□ 1.59
DDX60Q8IY21 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC24.97■■□□□ 1.59
DDX60Q8IY21 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC24.97■■□□□ 1.59
DDX60Q8IY21 RPS15-203ENST00000586096 570 ntTSL 2 BASIC24.97■■□□□ 1.59
DDX60Q8IY21 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
DDX60Q8IY21 PLK5-205ENST00000642079 1969 ntBASIC24.97■■□□□ 1.59
DDX60Q8IY21 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
DDX60Q8IY21 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC24.96■■□□□ 1.59
DDX60Q8IY21 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC24.96■■□□□ 1.59
DDX60Q8IY21 FDX2-207ENST00000494368 584 ntTSL 4 BASIC24.96■■□□□ 1.59
DDX60Q8IY21 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC24.96■■□□□ 1.59
DDX60Q8IY21 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC24.96■■□□□ 1.59
DDX60Q8IY21 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC24.96■■□□□ 1.59
DDX60Q8IY21 AC026471.5-201ENST00000615068 467 ntBASIC24.96■■□□□ 1.59
DDX60Q8IY21 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC24.96■■□□□ 1.59
DDX60Q8IY21 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC24.96■■□□□ 1.59
DDX60Q8IY21 SRI-203ENST00000419179 1307 ntTSL 2 BASIC24.96■■□□□ 1.59
DDX60Q8IY21 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC24.96■■□□□ 1.59
DDX60Q8IY21 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC24.95■■□□□ 1.59
DDX60Q8IY21 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC24.95■■□□□ 1.59
DDX60Q8IY21 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
DDX60Q8IY21 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
DDX60Q8IY21 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
DDX60Q8IY21 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC24.95■■□□□ 1.58
DDX60Q8IY21 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
DDX60Q8IY21 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
DDX60Q8IY21 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
DDX60Q8IY21 CD177P1-201ENST00000606252 935 ntBASIC24.95■■□□□ 1.58
DDX60Q8IY21 REXO1L10P-201ENST00000615707 1290 ntBASIC24.95■■□□□ 1.58
DDX60Q8IY21 REXO1L12P-201ENST00000622156 912 ntBASIC24.95■■□□□ 1.58
DDX60Q8IY21 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC24.95■■□□□ 1.58
DDX60Q8IY21 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
DDX60Q8IY21 HTR7P1-201ENST00000538670 1336 ntBASIC24.94■■□□□ 1.58
DDX60Q8IY21 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC24.94■■□□□ 1.58
DDX60Q8IY21 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
DDX60Q8IY21 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
DDX60Q8IY21 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
DDX60Q8IY21 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
DDX60Q8IY21 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC24.94■■□□□ 1.58
DDX60Q8IY21 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC24.94■■□□□ 1.58
DDX60Q8IY21 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC24.94■■□□□ 1.58
DDX60Q8IY21 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC24.94■■□□□ 1.58
DDX60Q8IY21 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC24.94■■□□□ 1.58
DDX60Q8IY21 AP003071.4-201ENST00000562276 1284 ntBASIC24.94■■□□□ 1.58
DDX60Q8IY21 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC24.94■■□□□ 1.58
DDX60Q8IY21 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC24.94■■□□□ 1.58
DDX60Q8IY21 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
DDX60Q8IY21 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC24.94■■□□□ 1.58
DDX60Q8IY21 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
DDX60Q8IY21 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC24.93■■□□□ 1.58
DDX60Q8IY21 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
DDX60Q8IY21 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
DDX60Q8IY21 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC24.93■■□□□ 1.58
DDX60Q8IY21 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
DDX60Q8IY21 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
DDX60Q8IY21 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
DDX60Q8IY21 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC24.93■■□□□ 1.58
DDX60Q8IY21 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC24.93■■□□□ 1.58
DDX60Q8IY21 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC24.93■■□□□ 1.58
DDX60Q8IY21 AC026310.3-201ENST00000625186 2373 ntBASIC24.93■■□□□ 1.58
DDX60Q8IY21 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
DDX60Q8IY21 KRT8P9-201ENST00000558927 1449 ntBASIC24.93■■□□□ 1.58
DDX60Q8IY21 RCN1P1-201ENST00000400413 996 ntBASIC24.92■■□□□ 1.58
DDX60Q8IY21 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
DDX60Q8IY21 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC24.92■■□□□ 1.58
DDX60Q8IY21 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC24.92■■□□□ 1.58
DDX60Q8IY21 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC24.92■■□□□ 1.58
DDX60Q8IY21 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC24.92■■□□□ 1.58
DDX60Q8IY21 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC24.92■■□□□ 1.58
DDX60Q8IY21 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
DDX60Q8IY21 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC24.92■■□□□ 1.58
DDX60Q8IY21 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
DDX60Q8IY21 KRT8P20-201ENST00000423953 1409 ntBASIC24.92■■□□□ 1.58
DDX60Q8IY21 AC005229.4-201ENST00000610085 2198 ntBASIC24.92■■□□□ 1.58
DDX60Q8IY21 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC24.92■■□□□ 1.58
DDX60Q8IY21 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC24.92■■□□□ 1.58
DDX60Q8IY21 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC24.92■■□□□ 1.58
DDX60Q8IY21 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC24.92■■□□□ 1.58
DDX60Q8IY21 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC24.92■■□□□ 1.58
DDX60Q8IY21 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC24.92■■□□□ 1.58
DDX60Q8IY21 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC24.92■■□□□ 1.58
DDX60Q8IY21 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
DDX60Q8IY21 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC24.92■■□□□ 1.58
DDX60Q8IY21 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC24.92■■□□□ 1.58
DDX60Q8IY21 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
DDX60Q8IY21 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
DDX60Q8IY21 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC24.91■■□□□ 1.58
DDX60Q8IY21 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
DDX60Q8IY21 NIFKP9-201ENST00000419265 221 ntBASIC24.91■■□□□ 1.58
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms