Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC20.87■□□□□ 0.93
NPAS3Q8IXF0 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NPAS3Q8IXF0 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NPAS3Q8IXF0 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NPAS3Q8IXF0 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC20.87■□□□□ 0.93
NPAS3Q8IXF0 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NPAS3Q8IXF0 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC20.86■□□□□ 0.93
NPAS3Q8IXF0 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
NPAS3Q8IXF0 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC20.86■□□□□ 0.93
NPAS3Q8IXF0 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NPAS3Q8IXF0 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC20.86■□□□□ 0.93
NPAS3Q8IXF0 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NPAS3Q8IXF0 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NPAS3Q8IXF0 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NPAS3Q8IXF0 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
NPAS3Q8IXF0 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC20.86■□□□□ 0.93
NPAS3Q8IXF0 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
NPAS3Q8IXF0 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
NPAS3Q8IXF0 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC20.86■□□□□ 0.93
NPAS3Q8IXF0 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC20.86■□□□□ 0.93
NPAS3Q8IXF0 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC20.86■□□□□ 0.93
NPAS3Q8IXF0 DECR2-212ENST00000627716 352 ntTSL 2 BASIC20.86■□□□□ 0.93
NPAS3Q8IXF0 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NPAS3Q8IXF0 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NPAS3Q8IXF0 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NPAS3Q8IXF0 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NPAS3Q8IXF0 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
NPAS3Q8IXF0 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
NPAS3Q8IXF0 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
NPAS3Q8IXF0 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC20.86■□□□□ 0.93
NPAS3Q8IXF0 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
NPAS3Q8IXF0 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
NPAS3Q8IXF0 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
NPAS3Q8IXF0 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
NPAS3Q8IXF0 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC20.85■□□□□ 0.93
NPAS3Q8IXF0 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
NPAS3Q8IXF0 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
NPAS3Q8IXF0 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
NPAS3Q8IXF0 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
NPAS3Q8IXF0 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC20.85■□□□□ 0.93
NPAS3Q8IXF0 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
NPAS3Q8IXF0 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC20.85■□□□□ 0.93
NPAS3Q8IXF0 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
NPAS3Q8IXF0 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
NPAS3Q8IXF0 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
NPAS3Q8IXF0 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
NPAS3Q8IXF0 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
NPAS3Q8IXF0 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
NPAS3Q8IXF0 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
NPAS3Q8IXF0 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NPAS3Q8IXF0 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC20.84■□□□□ 0.93
NPAS3Q8IXF0 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NPAS3Q8IXF0 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
NPAS3Q8IXF0 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NPAS3Q8IXF0 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC20.84■□□□□ 0.93
NPAS3Q8IXF0 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NPAS3Q8IXF0 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC20.84■□□□□ 0.93
NPAS3Q8IXF0 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC20.84■□□□□ 0.93
NPAS3Q8IXF0 AC004264.1-201ENST00000608354 794 ntBASIC20.84■□□□□ 0.93
NPAS3Q8IXF0 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC20.84■□□□□ 0.93
NPAS3Q8IXF0 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC20.84■□□□□ 0.93
NPAS3Q8IXF0 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
NPAS3Q8IXF0 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC20.84■□□□□ 0.93
NPAS3Q8IXF0 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
NPAS3Q8IXF0 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
NPAS3Q8IXF0 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NPAS3Q8IXF0 MYB-221ENST00000527615 2381 ntTSL 5 BASIC20.83■□□□□ 0.93
NPAS3Q8IXF0 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
NPAS3Q8IXF0 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
NPAS3Q8IXF0 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
NPAS3Q8IXF0 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
NPAS3Q8IXF0 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
NPAS3Q8IXF0 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
NPAS3Q8IXF0 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
NPAS3Q8IXF0 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
NPAS3Q8IXF0 TMPOP1-202ENST00000424642 1267 ntBASIC20.83■□□□□ 0.93
NPAS3Q8IXF0 RBM17P1-201ENST00000453646 1190 ntBASIC20.83■□□□□ 0.93
NPAS3Q8IXF0 NUDT16P1-203ENST00000513809 620 ntBASIC20.83■□□□□ 0.93
NPAS3Q8IXF0 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC20.83■□□□□ 0.93
NPAS3Q8IXF0 RN7SL850P-201ENST00000579959 291 ntBASIC20.83■□□□□ 0.93
NPAS3Q8IXF0 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC20.83■□□□□ 0.93
NPAS3Q8IXF0 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC20.83■□□□□ 0.93
NPAS3Q8IXF0 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC20.83■□□□□ 0.93
NPAS3Q8IXF0 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
NPAS3Q8IXF0 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
NPAS3Q8IXF0 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NPAS3Q8IXF0 PTBP1P-201ENST00000554374 1601 ntBASIC20.82■□□□□ 0.92
NPAS3Q8IXF0 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
NPAS3Q8IXF0 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
NPAS3Q8IXF0 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC20.82■□□□□ 0.92
NPAS3Q8IXF0 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
NPAS3Q8IXF0 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NPAS3Q8IXF0 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
NPAS3Q8IXF0 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NPAS3Q8IXF0 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC20.82■□□□□ 0.92
NPAS3Q8IXF0 AP002982.1-201ENST00000492365 877 ntBASIC20.82■□□□□ 0.92
NPAS3Q8IXF0 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC20.82■□□□□ 0.92
NPAS3Q8IXF0 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC20.82■□□□□ 0.92
NPAS3Q8IXF0 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
NPAS3Q8IXF0 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms