Protein–RNA interactions for Protein: Q8IWN7

RP1L1, Retinitis pigmentosa 1-like 1 protein, humanhuman

Predicted RBP Predictions only

Length 2,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RP1L1Q8IWN7 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC18.18■□□□□ 0.5
RP1L1Q8IWN7 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC18.18■□□□□ 0.5
RP1L1Q8IWN7 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RP1L1Q8IWN7 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RP1L1Q8IWN7 RPS15-203ENST00000586096 570 ntTSL 2 BASIC18.18■□□□□ 0.5
RP1L1Q8IWN7 AC004264.1-201ENST00000608354 794 ntBASIC18.18■□□□□ 0.5
RP1L1Q8IWN7 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
RP1L1Q8IWN7 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RP1L1Q8IWN7 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RP1L1Q8IWN7 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18.18■□□□□ 0.5
RP1L1Q8IWN7 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC18.18■□□□□ 0.5
RP1L1Q8IWN7 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RP1L1Q8IWN7 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RP1L1Q8IWN7 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RP1L1Q8IWN7 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC18.17■□□□□ 0.5
RP1L1Q8IWN7 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC18.17■□□□□ 0.5
RP1L1Q8IWN7 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
RP1L1Q8IWN7 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC18.17■□□□□ 0.5
RP1L1Q8IWN7 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RP1L1Q8IWN7 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RP1L1Q8IWN7 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC18.17■□□□□ 0.5
RP1L1Q8IWN7 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
RP1L1Q8IWN7 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
RP1L1Q8IWN7 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
RP1L1Q8IWN7 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
RP1L1Q8IWN7 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RP1L1Q8IWN7 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RP1L1Q8IWN7 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RP1L1Q8IWN7 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RP1L1Q8IWN7 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
RP1L1Q8IWN7 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
RP1L1Q8IWN7 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RP1L1Q8IWN7 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RP1L1Q8IWN7 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RP1L1Q8IWN7 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
RP1L1Q8IWN7 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
RP1L1Q8IWN7 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC18.16■□□□□ 0.5
RP1L1Q8IWN7 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
RP1L1Q8IWN7 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
RP1L1Q8IWN7 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
RP1L1Q8IWN7 CYP2D8P-201ENST00000433633 1490 ntBASIC18.16■□□□□ 0.5
RP1L1Q8IWN7 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
RP1L1Q8IWN7 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC18.16■□□□□ 0.5
RP1L1Q8IWN7 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC18.16■□□□□ 0.5
RP1L1Q8IWN7 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RP1L1Q8IWN7 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RP1L1Q8IWN7 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
RP1L1Q8IWN7 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RP1L1Q8IWN7 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC18.16■□□□□ 0.5
RP1L1Q8IWN7 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RP1L1Q8IWN7 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC18.16■□□□□ 0.5
RP1L1Q8IWN7 MMP23A-201ENST00000234610 1017 ntBASIC18.16■□□□□ 0.5
RP1L1Q8IWN7 RER1-204ENST00000378518 522 ntTSL 3 BASIC18.16■□□□□ 0.5
RP1L1Q8IWN7 KRT16P5-201ENST00000455284 522 ntBASIC18.16■□□□□ 0.5
RP1L1Q8IWN7 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC18.16■□□□□ 0.5
RP1L1Q8IWN7 AC005363.2-201ENST00000618631 242 ntBASIC18.16■□□□□ 0.5
RP1L1Q8IWN7 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RP1L1Q8IWN7 AC079598.2-202ENST00000546624 1451 ntBASIC18.15■□□□□ 0.5
RP1L1Q8IWN7 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RP1L1Q8IWN7 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
RP1L1Q8IWN7 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RP1L1Q8IWN7 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC18.15■□□□□ 0.5
RP1L1Q8IWN7 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC18.15■□□□□ 0.5
RP1L1Q8IWN7 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC18.15■□□□□ 0.5
RP1L1Q8IWN7 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RP1L1Q8IWN7 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RP1L1Q8IWN7 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
RP1L1Q8IWN7 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RP1L1Q8IWN7 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
RP1L1Q8IWN7 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
RP1L1Q8IWN7 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RP1L1Q8IWN7 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC18.15■□□□□ 0.5
RP1L1Q8IWN7 AC116562.2-201ENST00000507042 360 ntBASIC18.15■□□□□ 0.5
RP1L1Q8IWN7 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC18.15■□□□□ 0.5
RP1L1Q8IWN7 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC18.15■□□□□ 0.5
RP1L1Q8IWN7 AC010947.1-201ENST00000623454 693 ntBASIC18.15■□□□□ 0.5
RP1L1Q8IWN7 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC18.15■□□□□ 0.5
RP1L1Q8IWN7 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RP1L1Q8IWN7 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RP1L1Q8IWN7 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RP1L1Q8IWN7 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RP1L1Q8IWN7 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
RP1L1Q8IWN7 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
RP1L1Q8IWN7 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
RP1L1Q8IWN7 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
RP1L1Q8IWN7 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
RP1L1Q8IWN7 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC18.14■□□□□ 0.5
RP1L1Q8IWN7 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.5
RP1L1Q8IWN7 AL121829.2-201ENST00000620908 328 ntBASIC18.14■□□□□ 0.5
RP1L1Q8IWN7 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC18.14■□□□□ 0.5
RP1L1Q8IWN7 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC18.14■□□□□ 0.49
RP1L1Q8IWN7 STK25-205ENST00000405883 1904 ntTSL 2 BASIC18.14■□□□□ 0.49
RP1L1Q8IWN7 MED25-212ENST00000618715 1467 ntTSL 5 BASIC18.14■□□□□ 0.49
RP1L1Q8IWN7 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC18.14■□□□□ 0.49
RP1L1Q8IWN7 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RP1L1Q8IWN7 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RP1L1Q8IWN7 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RP1L1Q8IWN7 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RP1L1Q8IWN7 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC18.14■□□□□ 0.49
RP1L1Q8IWN7 SLC25A3P1-201ENST00000443844 931 ntBASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms