Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC21.62■■□□□ 1.05
NPAS4Q8IUM7 UNC93B2-201ENST00000285383 730 ntBASIC21.62■■□□□ 1.05
NPAS4Q8IUM7 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
NPAS4Q8IUM7 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC21.62■■□□□ 1.05
NPAS4Q8IUM7 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
NPAS4Q8IUM7 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC21.62■■□□□ 1.05
NPAS4Q8IUM7 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
NPAS4Q8IUM7 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC21.62■■□□□ 1.05
NPAS4Q8IUM7 RN7SL850P-201ENST00000579959 291 ntBASIC21.62■■□□□ 1.05
NPAS4Q8IUM7 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC21.62■■□□□ 1.05
NPAS4Q8IUM7 AC145285.6-201ENST00000604632 637 ntBASIC21.62■■□□□ 1.05
NPAS4Q8IUM7 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC21.62■■□□□ 1.05
NPAS4Q8IUM7 AC079598.2-202ENST00000546624 1451 ntBASIC21.62■■□□□ 1.05
NPAS4Q8IUM7 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
NPAS4Q8IUM7 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC21.62■■□□□ 1.05
NPAS4Q8IUM7 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
NPAS4Q8IUM7 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
NPAS4Q8IUM7 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
NPAS4Q8IUM7 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC21.61■■□□□ 1.05
NPAS4Q8IUM7 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
NPAS4Q8IUM7 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC21.61■■□□□ 1.05
NPAS4Q8IUM7 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC21.61■■□□□ 1.05
NPAS4Q8IUM7 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC21.61■■□□□ 1.05
NPAS4Q8IUM7 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
NPAS4Q8IUM7 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
NPAS4Q8IUM7 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC21.61■■□□□ 1.05
NPAS4Q8IUM7 MIR6786-201ENST00000616843 113 ntBASIC21.61■■□□□ 1.05
NPAS4Q8IUM7 GLDC-219ENST00000640208 420 ntTSL 2 BASIC21.61■■□□□ 1.05
NPAS4Q8IUM7 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
NPAS4Q8IUM7 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
NPAS4Q8IUM7 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
NPAS4Q8IUM7 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC21.61■■□□□ 1.05
NPAS4Q8IUM7 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
NPAS4Q8IUM7 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
NPAS4Q8IUM7 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
NPAS4Q8IUM7 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
NPAS4Q8IUM7 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
NPAS4Q8IUM7 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC21.6■■□□□ 1.05
NPAS4Q8IUM7 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
NPAS4Q8IUM7 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
NPAS4Q8IUM7 KSR1P1-201ENST00000446298 240 ntBASIC21.6■■□□□ 1.05
NPAS4Q8IUM7 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC21.6■■□□□ 1.05
NPAS4Q8IUM7 AP000525.1-201ENST00000608286 694 ntBASIC21.6■■□□□ 1.05
NPAS4Q8IUM7 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
NPAS4Q8IUM7 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC21.6■■□□□ 1.05
NPAS4Q8IUM7 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
NPAS4Q8IUM7 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
NPAS4Q8IUM7 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
NPAS4Q8IUM7 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC21.6■■□□□ 1.05
NPAS4Q8IUM7 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
NPAS4Q8IUM7 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
NPAS4Q8IUM7 BID-212ENST00000614949 1988 ntTSL 5 BASIC21.59■■□□□ 1.05
NPAS4Q8IUM7 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
NPAS4Q8IUM7 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC21.59■■□□□ 1.05
NPAS4Q8IUM7 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
NPAS4Q8IUM7 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
NPAS4Q8IUM7 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
NPAS4Q8IUM7 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
NPAS4Q8IUM7 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC21.59■■□□□ 1.05
NPAS4Q8IUM7 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
NPAS4Q8IUM7 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC21.59■■□□□ 1.05
NPAS4Q8IUM7 NIFKP9-201ENST00000419265 221 ntBASIC21.59■■□□□ 1.05
NPAS4Q8IUM7 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC21.59■■□□□ 1.05
NPAS4Q8IUM7 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC21.59■■□□□ 1.05
NPAS4Q8IUM7 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC21.59■■□□□ 1.05
NPAS4Q8IUM7 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC21.59■■□□□ 1.05
NPAS4Q8IUM7 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC21.59■■□□□ 1.05
NPAS4Q8IUM7 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC21.59■■□□□ 1.05
NPAS4Q8IUM7 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
NPAS4Q8IUM7 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
NPAS4Q8IUM7 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC21.58■■□□□ 1.05
NPAS4Q8IUM7 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC21.58■■□□□ 1.05
NPAS4Q8IUM7 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC21.58■■□□□ 1.05
NPAS4Q8IUM7 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
NPAS4Q8IUM7 KRT8P9-201ENST00000558927 1449 ntBASIC21.58■■□□□ 1.05
NPAS4Q8IUM7 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
NPAS4Q8IUM7 CALM3-202ENST00000391918 702 ntTSL 2 BASIC21.58■■□□□ 1.05
NPAS4Q8IUM7 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC21.58■■□□□ 1.05
NPAS4Q8IUM7 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC21.58■■□□□ 1.05
NPAS4Q8IUM7 AC005363.2-201ENST00000618631 242 ntBASIC21.58■■□□□ 1.05
NPAS4Q8IUM7 CR392000.1-201ENST00000624770 1228 ntBASIC21.58■■□□□ 1.05
NPAS4Q8IUM7 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
NPAS4Q8IUM7 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
NPAS4Q8IUM7 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC21.58■■□□□ 1.04
NPAS4Q8IUM7 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.04
NPAS4Q8IUM7 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC21.58■■□□□ 1.04
NPAS4Q8IUM7 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
NPAS4Q8IUM7 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
NPAS4Q8IUM7 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
NPAS4Q8IUM7 MIR1238-201ENST00000408483 83 ntBASIC21.57■■□□□ 1.04
NPAS4Q8IUM7 AC116562.2-201ENST00000507042 360 ntBASIC21.57■■□□□ 1.04
NPAS4Q8IUM7 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
NPAS4Q8IUM7 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
NPAS4Q8IUM7 AC092865.7-201ENST00000641832 219 ntBASIC21.57■■□□□ 1.04
NPAS4Q8IUM7 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC21.57■■□□□ 1.04
NPAS4Q8IUM7 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
NPAS4Q8IUM7 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC21.57■■□□□ 1.04
NPAS4Q8IUM7 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
NPAS4Q8IUM7 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
NPAS4Q8IUM7 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms