Protein–RNA interactions for Protein: Q86TM6

SYVN1, E3 ubiquitin-protein ligase synoviolin, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1Q86TM6 KRT8P36-201ENST00000489121 1440 ntBASIC19.72■□□□□ 0.75
SYVN1Q86TM6 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC19.72■□□□□ 0.75
SYVN1Q86TM6 CD44-222ENST00000526025 1052 ntTSL 2 BASIC19.72■□□□□ 0.75
SYVN1Q86TM6 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC19.72■□□□□ 0.75
SYVN1Q86TM6 AL591742.1-201ENST00000604433 565 ntBASIC19.72■□□□□ 0.75
SYVN1Q86TM6 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.72■□□□□ 0.75
SYVN1Q86TM6 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.72■□□□□ 0.75
SYVN1Q86TM6 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SYVN1Q86TM6 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
SYVN1Q86TM6 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SYVN1Q86TM6 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SYVN1Q86TM6 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
SYVN1Q86TM6 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SYVN1Q86TM6 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
SYVN1Q86TM6 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
SYVN1Q86TM6 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC19.71■□□□□ 0.75
SYVN1Q86TM6 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SYVN1Q86TM6 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.71■□□□□ 0.75
SYVN1Q86TM6 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SYVN1Q86TM6 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC19.71■□□□□ 0.75
SYVN1Q86TM6 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SYVN1Q86TM6 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC19.71■□□□□ 0.75
SYVN1Q86TM6 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC19.71■□□□□ 0.75
SYVN1Q86TM6 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SYVN1Q86TM6 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SYVN1Q86TM6 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC19.71■□□□□ 0.75
SYVN1Q86TM6 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
SYVN1Q86TM6 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SYVN1Q86TM6 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC19.71■□□□□ 0.75
SYVN1Q86TM6 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
SYVN1Q86TM6 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
SYVN1Q86TM6 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SYVN1Q86TM6 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.7■□□□□ 0.74
SYVN1Q86TM6 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SYVN1Q86TM6 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
SYVN1Q86TM6 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC19.7■□□□□ 0.74
SYVN1Q86TM6 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SYVN1Q86TM6 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
SYVN1Q86TM6 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
SYVN1Q86TM6 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SYVN1Q86TM6 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
SYVN1Q86TM6 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
SYVN1Q86TM6 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC19.7■□□□□ 0.74
SYVN1Q86TM6 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SYVN1Q86TM6 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC19.7■□□□□ 0.74
SYVN1Q86TM6 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
SYVN1Q86TM6 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC19.7■□□□□ 0.74
SYVN1Q86TM6 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
SYVN1Q86TM6 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SYVN1Q86TM6 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC19.7■□□□□ 0.74
SYVN1Q86TM6 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC19.7■□□□□ 0.74
SYVN1Q86TM6 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC19.69■□□□□ 0.74
SYVN1Q86TM6 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
SYVN1Q86TM6 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
SYVN1Q86TM6 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SYVN1Q86TM6 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
SYVN1Q86TM6 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
SYVN1Q86TM6 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SYVN1Q86TM6 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
SYVN1Q86TM6 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC19.69■□□□□ 0.74
SYVN1Q86TM6 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC19.69■□□□□ 0.74
SYVN1Q86TM6 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SYVN1Q86TM6 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SYVN1Q86TM6 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC19.69■□□□□ 0.74
SYVN1Q86TM6 SAPCD2P1-201ENST00000395413 1184 ntBASIC19.69■□□□□ 0.74
SYVN1Q86TM6 BX276092.2-201ENST00000417668 665 ntBASIC19.69■□□□□ 0.74
SYVN1Q86TM6 PBX1-209ENST00000485769 834 ntTSL 2 BASIC19.69■□□□□ 0.74
SYVN1Q86TM6 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SYVN1Q86TM6 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC19.69■□□□□ 0.74
SYVN1Q86TM6 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SYVN1Q86TM6 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SYVN1Q86TM6 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SYVN1Q86TM6 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC19.68■□□□□ 0.74
SYVN1Q86TM6 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC19.68■□□□□ 0.74
SYVN1Q86TM6 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC19.68■□□□□ 0.74
SYVN1Q86TM6 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SYVN1Q86TM6 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SYVN1Q86TM6 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC19.68■□□□□ 0.74
SYVN1Q86TM6 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC19.68■□□□□ 0.74
SYVN1Q86TM6 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SYVN1Q86TM6 RNA5SP413-201ENST00000516373 109 ntBASIC19.68■□□□□ 0.74
SYVN1Q86TM6 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC19.68■□□□□ 0.74
SYVN1Q86TM6 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC19.68■□□□□ 0.74
SYVN1Q86TM6 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SYVN1Q86TM6 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC19.68■□□□□ 0.74
SYVN1Q86TM6 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.68■□□□□ 0.74
SYVN1Q86TM6 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
SYVN1Q86TM6 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SYVN1Q86TM6 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC19.68■□□□□ 0.74
SYVN1Q86TM6 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SYVN1Q86TM6 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SYVN1Q86TM6 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SYVN1Q86TM6 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC19.67■□□□□ 0.74
SYVN1Q86TM6 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
SYVN1Q86TM6 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
SYVN1Q86TM6 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SYVN1Q86TM6 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC19.67■□□□□ 0.74
SYVN1Q86TM6 POU5F1P3-201ENST00000428824 1078 ntBASIC19.67■□□□□ 0.74
SYVN1Q86TM6 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC19.67■□□□□ 0.74
SYVN1Q86TM6 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms