Protein–RNA interactions for Protein: Q7Z5J4

RAI1, Retinoic acid-induced protein 1, humanhuman

Predicted RBP Predictions only

Length 1,906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI1Q7Z5J4 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC17.22■□□□□ 0.35
RAI1Q7Z5J4 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
RAI1Q7Z5J4 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC17.22■□□□□ 0.35
RAI1Q7Z5J4 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC17.22■□□□□ 0.35
RAI1Q7Z5J4 AL353708.3-201ENST00000610272 989 ntBASIC17.22■□□□□ 0.35
RAI1Q7Z5J4 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC17.22■□□□□ 0.35
RAI1Q7Z5J4 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
RAI1Q7Z5J4 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RAI1Q7Z5J4 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
RAI1Q7Z5J4 AC006128.1-201ENST00000624704 1661 ntBASIC17.22■□□□□ 0.35
RAI1Q7Z5J4 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC17.22■□□□□ 0.35
RAI1Q7Z5J4 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
RAI1Q7Z5J4 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RAI1Q7Z5J4 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RAI1Q7Z5J4 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RAI1Q7Z5J4 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RAI1Q7Z5J4 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RAI1Q7Z5J4 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC17.21■□□□□ 0.35
RAI1Q7Z5J4 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RAI1Q7Z5J4 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC17.21■□□□□ 0.35
RAI1Q7Z5J4 PRKY-204ENST00000533551 1019 ntBASIC17.21■□□□□ 0.35
RAI1Q7Z5J4 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC17.21■□□□□ 0.35
RAI1Q7Z5J4 AC010331.1-201ENST00000611423 582 ntBASIC17.21■□□□□ 0.35
RAI1Q7Z5J4 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
RAI1Q7Z5J4 AC097493.4-201ENST00000641197 219 ntBASIC17.21■□□□□ 0.35
RAI1Q7Z5J4 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RAI1Q7Z5J4 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RAI1Q7Z5J4 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC17.21■□□□□ 0.35
RAI1Q7Z5J4 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RAI1Q7Z5J4 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RAI1Q7Z5J4 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RAI1Q7Z5J4 KRT8P36-201ENST00000489121 1440 ntBASIC17.21■□□□□ 0.35
RAI1Q7Z5J4 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC17.21■□□□□ 0.35
RAI1Q7Z5J4 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RAI1Q7Z5J4 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC17.21■□□□□ 0.35
RAI1Q7Z5J4 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RAI1Q7Z5J4 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RAI1Q7Z5J4 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC17.21■□□□□ 0.35
RAI1Q7Z5J4 RN7SL850P-201ENST00000579959 291 ntBASIC17.21■□□□□ 0.35
RAI1Q7Z5J4 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RAI1Q7Z5J4 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RAI1Q7Z5J4 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
RAI1Q7Z5J4 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
RAI1Q7Z5J4 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
RAI1Q7Z5J4 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RAI1Q7Z5J4 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC17.2■□□□□ 0.34
RAI1Q7Z5J4 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RAI1Q7Z5J4 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RAI1Q7Z5J4 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RAI1Q7Z5J4 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RAI1Q7Z5J4 AL353807.1-201ENST00000427475 662 ntBASIC17.2■□□□□ 0.34
RAI1Q7Z5J4 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC17.2■□□□□ 0.34
RAI1Q7Z5J4 AC023632.3-201ENST00000521633 145 ntBASIC17.2■□□□□ 0.34
RAI1Q7Z5J4 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RAI1Q7Z5J4 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC17.2■□□□□ 0.34
RAI1Q7Z5J4 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC17.2■□□□□ 0.34
RAI1Q7Z5J4 AC133561.5-201ENST00000635547 218 ntBASIC17.2■□□□□ 0.34
RAI1Q7Z5J4 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RAI1Q7Z5J4 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
RAI1Q7Z5J4 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
RAI1Q7Z5J4 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RAI1Q7Z5J4 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RAI1Q7Z5J4 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC17.2■□□□□ 0.34
RAI1Q7Z5J4 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC17.2■□□□□ 0.34
RAI1Q7Z5J4 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RAI1Q7Z5J4 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RAI1Q7Z5J4 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
RAI1Q7Z5J4 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RAI1Q7Z5J4 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC17.19■□□□□ 0.34
RAI1Q7Z5J4 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
RAI1Q7Z5J4 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC17.19■□□□□ 0.34
RAI1Q7Z5J4 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC17.19■□□□□ 0.34
RAI1Q7Z5J4 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC17.19■□□□□ 0.34
RAI1Q7Z5J4 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC17.19■□□□□ 0.34
RAI1Q7Z5J4 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC17.19■□□□□ 0.34
RAI1Q7Z5J4 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RAI1Q7Z5J4 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
RAI1Q7Z5J4 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RAI1Q7Z5J4 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RAI1Q7Z5J4 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RAI1Q7Z5J4 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC17.18■□□□□ 0.34
RAI1Q7Z5J4 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
RAI1Q7Z5J4 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
RAI1Q7Z5J4 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RAI1Q7Z5J4 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
RAI1Q7Z5J4 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC17.18■□□□□ 0.34
RAI1Q7Z5J4 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RAI1Q7Z5J4 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RAI1Q7Z5J4 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC17.18■□□□□ 0.34
RAI1Q7Z5J4 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RAI1Q7Z5J4 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC17.18■□□□□ 0.34
RAI1Q7Z5J4 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RAI1Q7Z5J4 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RAI1Q7Z5J4 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC17.18■□□□□ 0.34
RAI1Q7Z5J4 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RAI1Q7Z5J4 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RAI1Q7Z5J4 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC17.18■□□□□ 0.34
RAI1Q7Z5J4 SRI-203ENST00000419179 1307 ntTSL 2 BASIC17.18■□□□□ 0.34
RAI1Q7Z5J4 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RAI1Q7Z5J4 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms