Protein–RNA interactions for Protein: Q6VY07

PACS1, Phosphofurin acidic cluster sorting protein 1, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1Q6VY07 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC20.27■□□□□ 0.84
PACS1Q6VY07 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
PACS1Q6VY07 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.83
PACS1Q6VY07 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
PACS1Q6VY07 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
PACS1Q6VY07 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
PACS1Q6VY07 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.83
PACS1Q6VY07 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.83
PACS1Q6VY07 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
PACS1Q6VY07 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PACS1Q6VY07 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC20.26■□□□□ 0.83
PACS1Q6VY07 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
PACS1Q6VY07 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PACS1Q6VY07 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PACS1Q6VY07 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PACS1Q6VY07 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PACS1Q6VY07 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC20.26■□□□□ 0.83
PACS1Q6VY07 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC20.26■□□□□ 0.83
PACS1Q6VY07 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC20.26■□□□□ 0.83
PACS1Q6VY07 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC20.26■□□□□ 0.83
PACS1Q6VY07 AC069236.1-201ENST00000604339 616 ntBASIC20.26■□□□□ 0.83
PACS1Q6VY07 AC005181.1-201ENST00000604782 1256 ntBASIC20.26■□□□□ 0.83
PACS1Q6VY07 AC100791.3-201ENST00000617619 330 ntBASIC20.26■□□□□ 0.83
PACS1Q6VY07 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PACS1Q6VY07 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC20.26■□□□□ 0.83
PACS1Q6VY07 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC20.26■□□□□ 0.83
PACS1Q6VY07 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PACS1Q6VY07 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PACS1Q6VY07 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC20.26■□□□□ 0.83
PACS1Q6VY07 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PACS1Q6VY07 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC20.25■□□□□ 0.83
PACS1Q6VY07 AC125437.2-201ENST00000625180 2167 ntBASIC20.25■□□□□ 0.83
PACS1Q6VY07 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
PACS1Q6VY07 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC20.25■□□□□ 0.83
PACS1Q6VY07 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PACS1Q6VY07 LBX2-AS1-202ENST00000603175 2083 ntBASIC20.25■□□□□ 0.83
PACS1Q6VY07 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC20.25■□□□□ 0.83
PACS1Q6VY07 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
PACS1Q6VY07 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
PACS1Q6VY07 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC20.25■□□□□ 0.83
PACS1Q6VY07 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PACS1Q6VY07 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
PACS1Q6VY07 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC20.25■□□□□ 0.83
PACS1Q6VY07 AC026185.1-201ENST00000445748 174 ntBASIC20.25■□□□□ 0.83
PACS1Q6VY07 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PACS1Q6VY07 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PACS1Q6VY07 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
PACS1Q6VY07 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PACS1Q6VY07 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PACS1Q6VY07 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC20.24■□□□□ 0.83
PACS1Q6VY07 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
PACS1Q6VY07 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
PACS1Q6VY07 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PACS1Q6VY07 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PACS1Q6VY07 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
PACS1Q6VY07 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PACS1Q6VY07 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC20.24■□□□□ 0.83
PACS1Q6VY07 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC20.24■□□□□ 0.83
PACS1Q6VY07 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
PACS1Q6VY07 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
PACS1Q6VY07 OR10C1-204ENST00000622521 1039 ntBASIC20.24■□□□□ 0.83
PACS1Q6VY07 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC20.24■□□□□ 0.83
PACS1Q6VY07 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PACS1Q6VY07 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
PACS1Q6VY07 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PACS1Q6VY07 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PACS1Q6VY07 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PACS1Q6VY07 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PACS1Q6VY07 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PACS1Q6VY07 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
PACS1Q6VY07 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PACS1Q6VY07 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PACS1Q6VY07 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PACS1Q6VY07 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
PACS1Q6VY07 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PACS1Q6VY07 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PACS1Q6VY07 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PACS1Q6VY07 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PACS1Q6VY07 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PACS1Q6VY07 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC20.23■□□□□ 0.83
PACS1Q6VY07 AC008694.1-202ENST00000636953 945 ntBASIC20.23■□□□□ 0.83
PACS1Q6VY07 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC20.23■□□□□ 0.83
PACS1Q6VY07 CYP21A1P-202ENST00000354927 1481 ntBASIC20.23■□□□□ 0.83
PACS1Q6VY07 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC20.23■□□□□ 0.83
PACS1Q6VY07 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PACS1Q6VY07 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PACS1Q6VY07 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
PACS1Q6VY07 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
PACS1Q6VY07 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
PACS1Q6VY07 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC20.22■□□□□ 0.83
PACS1Q6VY07 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PACS1Q6VY07 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
PACS1Q6VY07 AC087633.2-202ENST00000565166 1439 ntBASIC20.22■□□□□ 0.83
PACS1Q6VY07 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC20.22■□□□□ 0.83
PACS1Q6VY07 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
PACS1Q6VY07 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC20.22■□□□□ 0.83
PACS1Q6VY07 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC20.22■□□□□ 0.83
PACS1Q6VY07 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PACS1Q6VY07 PGM5P4-201ENST00000421970 445 ntBASIC20.22■□□□□ 0.83
PACS1Q6VY07 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC20.22■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms