Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20.85■□□□□ 0.93
FOXR1Q6PIV2 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
FOXR1Q6PIV2 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
FOXR1Q6PIV2 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
FOXR1Q6PIV2 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC20.85■□□□□ 0.93
FOXR1Q6PIV2 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC20.85■□□□□ 0.93
FOXR1Q6PIV2 AL049812.1-201ENST00000432563 2267 ntBASIC20.85■□□□□ 0.93
FOXR1Q6PIV2 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
FOXR1Q6PIV2 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
FOXR1Q6PIV2 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
FOXR1Q6PIV2 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
FOXR1Q6PIV2 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
FOXR1Q6PIV2 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
FOXR1Q6PIV2 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC20.84■□□□□ 0.93
FOXR1Q6PIV2 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC20.84■□□□□ 0.93
FOXR1Q6PIV2 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC20.84■□□□□ 0.93
FOXR1Q6PIV2 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC20.84■□□□□ 0.93
FOXR1Q6PIV2 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
FOXR1Q6PIV2 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC20.84■□□□□ 0.93
FOXR1Q6PIV2 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC20.84■□□□□ 0.93
FOXR1Q6PIV2 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC20.84■□□□□ 0.93
FOXR1Q6PIV2 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC20.84■□□□□ 0.93
FOXR1Q6PIV2 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
FOXR1Q6PIV2 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
FOXR1Q6PIV2 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
FOXR1Q6PIV2 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
FOXR1Q6PIV2 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC20.84■□□□□ 0.93
FOXR1Q6PIV2 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
FOXR1Q6PIV2 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC20.84■□□□□ 0.93
FOXR1Q6PIV2 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
FOXR1Q6PIV2 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC20.84■□□□□ 0.93
FOXR1Q6PIV2 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC20.84■□□□□ 0.93
FOXR1Q6PIV2 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
FOXR1Q6PIV2 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC20.84■□□□□ 0.93
FOXR1Q6PIV2 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
FOXR1Q6PIV2 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
FOXR1Q6PIV2 TCF3P1-201ENST00000423021 1937 ntBASIC20.84■□□□□ 0.93
FOXR1Q6PIV2 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC20.84■□□□□ 0.93
FOXR1Q6PIV2 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
FOXR1Q6PIV2 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC20.83■□□□□ 0.93
FOXR1Q6PIV2 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC20.83■□□□□ 0.93
FOXR1Q6PIV2 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC20.83■□□□□ 0.93
FOXR1Q6PIV2 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC20.83■□□□□ 0.93
FOXR1Q6PIV2 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
FOXR1Q6PIV2 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
FOXR1Q6PIV2 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
FOXR1Q6PIV2 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
FOXR1Q6PIV2 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
FOXR1Q6PIV2 METTL26-203ENST00000397664 604 ntTSL 2 BASIC20.83■□□□□ 0.93
FOXR1Q6PIV2 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
FOXR1Q6PIV2 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC20.83■□□□□ 0.93
FOXR1Q6PIV2 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC20.83■□□□□ 0.93
FOXR1Q6PIV2 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC20.83■□□□□ 0.92
FOXR1Q6PIV2 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
FOXR1Q6PIV2 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
FOXR1Q6PIV2 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC20.83■□□□□ 0.92
FOXR1Q6PIV2 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.83■□□□□ 0.92
FOXR1Q6PIV2 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.92
FOXR1Q6PIV2 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
FOXR1Q6PIV2 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC20.83■□□□□ 0.92
FOXR1Q6PIV2 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
FOXR1Q6PIV2 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC20.82■□□□□ 0.92
FOXR1Q6PIV2 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC20.82■□□□□ 0.92
FOXR1Q6PIV2 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
FOXR1Q6PIV2 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
FOXR1Q6PIV2 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
FOXR1Q6PIV2 KRT18P11-201ENST00000435214 1283 ntBASIC20.82■□□□□ 0.92
FOXR1Q6PIV2 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
FOXR1Q6PIV2 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
FOXR1Q6PIV2 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC20.82■□□□□ 0.92
FOXR1Q6PIV2 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC20.82■□□□□ 0.92
FOXR1Q6PIV2 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
FOXR1Q6PIV2 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC20.82■□□□□ 0.92
FOXR1Q6PIV2 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
FOXR1Q6PIV2 BID-203ENST00000399765 1879 ntTSL 2 BASIC20.81■□□□□ 0.92
FOXR1Q6PIV2 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
FOXR1Q6PIV2 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
FOXR1Q6PIV2 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
FOXR1Q6PIV2 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
FOXR1Q6PIV2 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
FOXR1Q6PIV2 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
FOXR1Q6PIV2 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
FOXR1Q6PIV2 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC20.81■□□□□ 0.92
FOXR1Q6PIV2 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
FOXR1Q6PIV2 ASL-203ENST00000380839 1765 ntTSL 5 BASIC20.81■□□□□ 0.92
FOXR1Q6PIV2 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC20.81■□□□□ 0.92
FOXR1Q6PIV2 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
FOXR1Q6PIV2 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC20.81■□□□□ 0.92
FOXR1Q6PIV2 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
FOXR1Q6PIV2 ADK-206ENST00000541550 2222 ntTSL 2 BASIC20.81■□□□□ 0.92
FOXR1Q6PIV2 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
FOXR1Q6PIV2 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
FOXR1Q6PIV2 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
FOXR1Q6PIV2 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
FOXR1Q6PIV2 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
FOXR1Q6PIV2 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
FOXR1Q6PIV2 GPX1P1-201ENST00000388829 606 ntBASIC20.8■□□□□ 0.92
FOXR1Q6PIV2 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC20.8■□□□□ 0.92
FOXR1Q6PIV2 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
FOXR1Q6PIV2 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms