Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LYSMD4Q5XG99 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC19.8■□□□□ 0.76
LYSMD4Q5XG99 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC19.79■□□□□ 0.76
LYSMD4Q5XG99 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
LYSMD4Q5XG99 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
LYSMD4Q5XG99 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC19.79■□□□□ 0.76
LYSMD4Q5XG99 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC19.79■□□□□ 0.76
LYSMD4Q5XG99 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
LYSMD4Q5XG99 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LYSMD4Q5XG99 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.79■□□□□ 0.76
LYSMD4Q5XG99 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LYSMD4Q5XG99 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
LYSMD4Q5XG99 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC19.79■□□□□ 0.76
LYSMD4Q5XG99 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LYSMD4Q5XG99 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.79■□□□□ 0.76
LYSMD4Q5XG99 SLC25A3P1-201ENST00000443844 931 ntBASIC19.79■□□□□ 0.76
LYSMD4Q5XG99 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.79■□□□□ 0.76
LYSMD4Q5XG99 TMA16-209ENST00000513272 803 ntTSL 2 BASIC19.79■□□□□ 0.76
LYSMD4Q5XG99 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC19.79■□□□□ 0.76
LYSMD4Q5XG99 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
LYSMD4Q5XG99 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LYSMD4Q5XG99 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LYSMD4Q5XG99 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
LYSMD4Q5XG99 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
LYSMD4Q5XG99 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LYSMD4Q5XG99 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC19.78■□□□□ 0.76
LYSMD4Q5XG99 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LYSMD4Q5XG99 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
LYSMD4Q5XG99 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
LYSMD4Q5XG99 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC19.78■□□□□ 0.76
LYSMD4Q5XG99 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC19.78■□□□□ 0.76
LYSMD4Q5XG99 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LYSMD4Q5XG99 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC19.78■□□□□ 0.76
LYSMD4Q5XG99 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LYSMD4Q5XG99 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC19.78■□□□□ 0.76
LYSMD4Q5XG99 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC19.78■□□□□ 0.76
LYSMD4Q5XG99 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
LYSMD4Q5XG99 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC19.78■□□□□ 0.76
LYSMD4Q5XG99 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC19.78■□□□□ 0.76
LYSMD4Q5XG99 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LYSMD4Q5XG99 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC19.78■□□□□ 0.76
LYSMD4Q5XG99 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LYSMD4Q5XG99 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
LYSMD4Q5XG99 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LYSMD4Q5XG99 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
LYSMD4Q5XG99 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
LYSMD4Q5XG99 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
LYSMD4Q5XG99 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
LYSMD4Q5XG99 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
LYSMD4Q5XG99 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
LYSMD4Q5XG99 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC19.77■□□□□ 0.76
LYSMD4Q5XG99 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
LYSMD4Q5XG99 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC19.77■□□□□ 0.76
LYSMD4Q5XG99 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
LYSMD4Q5XG99 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
LYSMD4Q5XG99 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC19.77■□□□□ 0.76
LYSMD4Q5XG99 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
LYSMD4Q5XG99 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
LYSMD4Q5XG99 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
LYSMD4Q5XG99 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
LYSMD4Q5XG99 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.75
LYSMD4Q5XG99 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
LYSMD4Q5XG99 AC233723.2-201ENST00000623798 2106 ntBASIC19.76■□□□□ 0.75
LYSMD4Q5XG99 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC19.76■□□□□ 0.75
LYSMD4Q5XG99 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LYSMD4Q5XG99 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC19.76■□□□□ 0.75
LYSMD4Q5XG99 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
LYSMD4Q5XG99 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC19.76■□□□□ 0.75
LYSMD4Q5XG99 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC19.76■□□□□ 0.75
LYSMD4Q5XG99 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC19.76■□□□□ 0.75
LYSMD4Q5XG99 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
LYSMD4Q5XG99 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC19.76■□□□□ 0.75
LYSMD4Q5XG99 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC19.76■□□□□ 0.75
LYSMD4Q5XG99 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC19.76■□□□□ 0.75
LYSMD4Q5XG99 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC19.76■□□□□ 0.75
LYSMD4Q5XG99 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
LYSMD4Q5XG99 KRT8P20-201ENST00000423953 1409 ntBASIC19.76■□□□□ 0.75
LYSMD4Q5XG99 AC073508.3-201ENST00000619697 1419 ntBASIC19.76■□□□□ 0.75
LYSMD4Q5XG99 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
LYSMD4Q5XG99 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LYSMD4Q5XG99 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LYSMD4Q5XG99 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
LYSMD4Q5XG99 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC19.75■□□□□ 0.75
LYSMD4Q5XG99 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LYSMD4Q5XG99 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
LYSMD4Q5XG99 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC19.75■□□□□ 0.75
LYSMD4Q5XG99 CFL2-205ENST00000555765 632 ntTSL 2 BASIC19.75■□□□□ 0.75
LYSMD4Q5XG99 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC19.75■□□□□ 0.75
LYSMD4Q5XG99 CLN6-221ENST00000637494 765 ntTSL 5 BASIC19.75■□□□□ 0.75
LYSMD4Q5XG99 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC19.75■□□□□ 0.75
LYSMD4Q5XG99 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
LYSMD4Q5XG99 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
LYSMD4Q5XG99 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LYSMD4Q5XG99 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
LYSMD4Q5XG99 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LYSMD4Q5XG99 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
LYSMD4Q5XG99 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
LYSMD4Q5XG99 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC19.74■□□□□ 0.75
LYSMD4Q5XG99 CALM3-202ENST00000391918 702 ntTSL 2 BASIC19.74■□□□□ 0.75
LYSMD4Q5XG99 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC19.74■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms