Protein–RNA interactions for Protein: Q5VT99

LRRC38, Leucine-rich repeat-containing protein 38, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC38Q5VT99 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
LRRC38Q5VT99 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LRRC38Q5VT99 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
LRRC38Q5VT99 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
LRRC38Q5VT99 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
LRRC38Q5VT99 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LRRC38Q5VT99 AC010980.2-201ENST00000587099 1412 ntBASIC20.87■□□□□ 0.93
LRRC38Q5VT99 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LRRC38Q5VT99 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC20.87■□□□□ 0.93
LRRC38Q5VT99 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
LRRC38Q5VT99 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC20.86■□□□□ 0.93
LRRC38Q5VT99 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC20.86■□□□□ 0.93
LRRC38Q5VT99 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
LRRC38Q5VT99 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC20.86■□□□□ 0.93
LRRC38Q5VT99 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC20.86■□□□□ 0.93
LRRC38Q5VT99 AL589743.5-201ENST00000616611 1050 ntBASIC20.86■□□□□ 0.93
LRRC38Q5VT99 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
LRRC38Q5VT99 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
LRRC38Q5VT99 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
LRRC38Q5VT99 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
LRRC38Q5VT99 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
LRRC38Q5VT99 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
LRRC38Q5VT99 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
LRRC38Q5VT99 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
LRRC38Q5VT99 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
LRRC38Q5VT99 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
LRRC38Q5VT99 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC20.86■□□□□ 0.93
LRRC38Q5VT99 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC20.86■□□□□ 0.93
LRRC38Q5VT99 KRT8P20-201ENST00000423953 1409 ntBASIC20.86■□□□□ 0.93
LRRC38Q5VT99 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
LRRC38Q5VT99 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
LRRC38Q5VT99 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
LRRC38Q5VT99 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC20.85■□□□□ 0.93
LRRC38Q5VT99 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC20.85■□□□□ 0.93
LRRC38Q5VT99 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC20.85■□□□□ 0.93
LRRC38Q5VT99 AC009237.14-201ENST00000609975 1594 ntBASIC20.85■□□□□ 0.93
LRRC38Q5VT99 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
LRRC38Q5VT99 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LRRC38Q5VT99 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
LRRC38Q5VT99 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC20.85■□□□□ 0.93
LRRC38Q5VT99 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LRRC38Q5VT99 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
LRRC38Q5VT99 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
LRRC38Q5VT99 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC20.85■□□□□ 0.93
LRRC38Q5VT99 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
LRRC38Q5VT99 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
LRRC38Q5VT99 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC20.85■□□□□ 0.93
LRRC38Q5VT99 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
LRRC38Q5VT99 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC20.85■□□□□ 0.93
LRRC38Q5VT99 BRWD1-AS2-201ENST00000603064 1028 ntBASIC20.85■□□□□ 0.93
LRRC38Q5VT99 MAZ-216ENST00000616501 991 ntTSL 5 BASIC20.85■□□□□ 0.93
LRRC38Q5VT99 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC20.85■□□□□ 0.93
LRRC38Q5VT99 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LRRC38Q5VT99 KRT16P6-202ENST00000425692 1426 ntBASIC20.85■□□□□ 0.93
LRRC38Q5VT99 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LRRC38Q5VT99 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LRRC38Q5VT99 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
LRRC38Q5VT99 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LRRC38Q5VT99 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LRRC38Q5VT99 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
LRRC38Q5VT99 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LRRC38Q5VT99 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
LRRC38Q5VT99 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
LRRC38Q5VT99 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LRRC38Q5VT99 AL355472.2-201ENST00000422958 438 ntBASIC20.84■□□□□ 0.93
LRRC38Q5VT99 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC20.84■□□□□ 0.93
LRRC38Q5VT99 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC20.84■□□□□ 0.93
LRRC38Q5VT99 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LRRC38Q5VT99 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LRRC38Q5VT99 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC20.84■□□□□ 0.93
LRRC38Q5VT99 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
LRRC38Q5VT99 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC20.84■□□□□ 0.93
LRRC38Q5VT99 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC20.84■□□□□ 0.93
LRRC38Q5VT99 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
LRRC38Q5VT99 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LRRC38Q5VT99 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC20.83■□□□□ 0.93
LRRC38Q5VT99 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
LRRC38Q5VT99 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
LRRC38Q5VT99 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
LRRC38Q5VT99 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC20.83■□□□□ 0.93
LRRC38Q5VT99 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC20.83■□□□□ 0.93
LRRC38Q5VT99 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
LRRC38Q5VT99 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
LRRC38Q5VT99 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
LRRC38Q5VT99 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC20.83■□□□□ 0.92
LRRC38Q5VT99 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
LRRC38Q5VT99 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
LRRC38Q5VT99 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
LRRC38Q5VT99 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC20.82■□□□□ 0.92
LRRC38Q5VT99 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
LRRC38Q5VT99 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
LRRC38Q5VT99 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
LRRC38Q5VT99 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
LRRC38Q5VT99 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
LRRC38Q5VT99 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
LRRC38Q5VT99 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
LRRC38Q5VT99 C2orf69P4-201ENST00000565394 541 ntBASIC20.82■□□□□ 0.92
LRRC38Q5VT99 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC20.82■□□□□ 0.92
LRRC38Q5VT99 AC005181.1-201ENST00000604782 1256 ntBASIC20.82■□□□□ 0.92
LRRC38Q5VT99 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC20.82■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 65 ms