Protein–RNA interactions for Protein: Q5T2R2

PDSS1, Decaprenyl-diphosphate synthase subunit 1, humanhuman

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDSS1Q5T2R2 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
PDSS1Q5T2R2 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC18.2■□□□□ 0.5
PDSS1Q5T2R2 KLF13-207ENST00000560473 489 ntTSL 3 BASIC18.2■□□□□ 0.5
PDSS1Q5T2R2 AC098934.4-201ENST00000564127 592 ntBASIC18.2■□□□□ 0.5
PDSS1Q5T2R2 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC18.2■□□□□ 0.5
PDSS1Q5T2R2 AC007225.1-201ENST00000566331 1836 ntBASIC18.2■□□□□ 0.5
PDSS1Q5T2R2 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PDSS1Q5T2R2 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC18.2■□□□□ 0.5
PDSS1Q5T2R2 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PDSS1Q5T2R2 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PDSS1Q5T2R2 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PDSS1Q5T2R2 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC18.2■□□□□ 0.5
PDSS1Q5T2R2 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
PDSS1Q5T2R2 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PDSS1Q5T2R2 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PDSS1Q5T2R2 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
PDSS1Q5T2R2 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
PDSS1Q5T2R2 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
PDSS1Q5T2R2 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC18.19■□□□□ 0.5
PDSS1Q5T2R2 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC18.19■□□□□ 0.5
PDSS1Q5T2R2 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PDSS1Q5T2R2 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC18.19■□□□□ 0.5
PDSS1Q5T2R2 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.19■□□□□ 0.5
PDSS1Q5T2R2 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC18.19■□□□□ 0.5
PDSS1Q5T2R2 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PDSS1Q5T2R2 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PDSS1Q5T2R2 MFF-205ENST00000354503 1085 ntTSL 2 BASIC18.19■□□□□ 0.5
PDSS1Q5T2R2 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PDSS1Q5T2R2 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PDSS1Q5T2R2 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
PDSS1Q5T2R2 KRT18P6-201ENST00000555540 1265 ntBASIC18.19■□□□□ 0.5
PDSS1Q5T2R2 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
PDSS1Q5T2R2 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
PDSS1Q5T2R2 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PDSS1Q5T2R2 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
PDSS1Q5T2R2 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC18.19■□□□□ 0.5
PDSS1Q5T2R2 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
PDSS1Q5T2R2 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PDSS1Q5T2R2 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
PDSS1Q5T2R2 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
PDSS1Q5T2R2 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PDSS1Q5T2R2 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
PDSS1Q5T2R2 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC18.18■□□□□ 0.5
PDSS1Q5T2R2 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
PDSS1Q5T2R2 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC18.18■□□□□ 0.5
PDSS1Q5T2R2 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PDSS1Q5T2R2 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
PDSS1Q5T2R2 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PDSS1Q5T2R2 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PDSS1Q5T2R2 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PDSS1Q5T2R2 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC18.18■□□□□ 0.5
PDSS1Q5T2R2 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
PDSS1Q5T2R2 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PDSS1Q5T2R2 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC18.18■□□□□ 0.5
PDSS1Q5T2R2 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
PDSS1Q5T2R2 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC18.18■□□□□ 0.5
PDSS1Q5T2R2 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PDSS1Q5T2R2 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
PDSS1Q5T2R2 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC18.18■□□□□ 0.5
PDSS1Q5T2R2 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
PDSS1Q5T2R2 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PDSS1Q5T2R2 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC18.18■□□□□ 0.5
PDSS1Q5T2R2 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.18■□□□□ 0.5
PDSS1Q5T2R2 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PDSS1Q5T2R2 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
PDSS1Q5T2R2 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PDSS1Q5T2R2 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PDSS1Q5T2R2 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
PDSS1Q5T2R2 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC18.17■□□□□ 0.5
PDSS1Q5T2R2 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC18.17■□□□□ 0.5
PDSS1Q5T2R2 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PDSS1Q5T2R2 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PDSS1Q5T2R2 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
PDSS1Q5T2R2 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PDSS1Q5T2R2 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PDSS1Q5T2R2 GATS-209ENST00000454084 1030 ntTSL 3 BASIC18.17■□□□□ 0.5
PDSS1Q5T2R2 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC18.17■□□□□ 0.5
PDSS1Q5T2R2 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC18.17■□□□□ 0.5
PDSS1Q5T2R2 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
PDSS1Q5T2R2 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PDSS1Q5T2R2 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PDSS1Q5T2R2 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
PDSS1Q5T2R2 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PDSS1Q5T2R2 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC18.17■□□□□ 0.5
PDSS1Q5T2R2 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PDSS1Q5T2R2 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PDSS1Q5T2R2 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PDSS1Q5T2R2 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PDSS1Q5T2R2 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
PDSS1Q5T2R2 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC18.16■□□□□ 0.5
PDSS1Q5T2R2 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PDSS1Q5T2R2 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PDSS1Q5T2R2 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC18.16■□□□□ 0.5
PDSS1Q5T2R2 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
PDSS1Q5T2R2 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC18.16■□□□□ 0.5
PDSS1Q5T2R2 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC18.16■□□□□ 0.5
PDSS1Q5T2R2 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC18.16■□□□□ 0.5
PDSS1Q5T2R2 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC18.16■□□□□ 0.5
PDSS1Q5T2R2 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC18.16■□□□□ 0.5
PDSS1Q5T2R2 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms