Protein–RNA interactions for Protein: Q5SRH9

TTC39A, Tetratricopeptide repeat protein 39A, humanhuman

Predictions only

Length 613 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39AQ5SRH9 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC24.46■■□□□ 1.51
TTC39AQ5SRH9 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
TTC39AQ5SRH9 THEM4-205ENST00000489410 643 ntTSL 2 BASIC24.46■■□□□ 1.51
TTC39AQ5SRH9 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC24.46■■□□□ 1.51
TTC39AQ5SRH9 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC24.46■■□□□ 1.51
TTC39AQ5SRH9 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC24.46■■□□□ 1.51
TTC39AQ5SRH9 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
TTC39AQ5SRH9 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC24.46■■□□□ 1.51
TTC39AQ5SRH9 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC24.46■■□□□ 1.51
TTC39AQ5SRH9 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC24.45■■□□□ 1.51
TTC39AQ5SRH9 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
TTC39AQ5SRH9 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
TTC39AQ5SRH9 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC24.45■■□□□ 1.5
TTC39AQ5SRH9 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
TTC39AQ5SRH9 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
TTC39AQ5SRH9 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC24.45■■□□□ 1.5
TTC39AQ5SRH9 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
TTC39AQ5SRH9 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC24.45■■□□□ 1.5
TTC39AQ5SRH9 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC24.45■■□□□ 1.5
TTC39AQ5SRH9 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
TTC39AQ5SRH9 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC24.45■■□□□ 1.5
TTC39AQ5SRH9 SMG8-203ENST00000578922 2178 ntBASIC24.44■■□□□ 1.5
TTC39AQ5SRH9 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC24.44■■□□□ 1.5
TTC39AQ5SRH9 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
TTC39AQ5SRH9 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC24.44■■□□□ 1.5
TTC39AQ5SRH9 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC24.44■■□□□ 1.5
TTC39AQ5SRH9 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC24.44■■□□□ 1.5
TTC39AQ5SRH9 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
TTC39AQ5SRH9 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC24.44■■□□□ 1.5
TTC39AQ5SRH9 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
TTC39AQ5SRH9 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC24.44■■□□□ 1.5
TTC39AQ5SRH9 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
TTC39AQ5SRH9 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
TTC39AQ5SRH9 AC124283.5-201ENST00000624661 1809 ntBASIC24.43■■□□□ 1.5
TTC39AQ5SRH9 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
TTC39AQ5SRH9 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC24.43■■□□□ 1.5
TTC39AQ5SRH9 RPS2P52-201ENST00000469610 820 ntBASIC24.43■■□□□ 1.5
TTC39AQ5SRH9 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
TTC39AQ5SRH9 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
TTC39AQ5SRH9 AC142381.4-202ENST00000563973 229 ntBASIC24.43■■□□□ 1.5
TTC39AQ5SRH9 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC24.43■■□□□ 1.5
TTC39AQ5SRH9 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC24.43■■□□□ 1.5
TTC39AQ5SRH9 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC24.43■■□□□ 1.5
TTC39AQ5SRH9 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC24.43■■□□□ 1.5
TTC39AQ5SRH9 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
TTC39AQ5SRH9 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC24.43■■□□□ 1.5
TTC39AQ5SRH9 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC24.42■■□□□ 1.5
TTC39AQ5SRH9 AC073314.1-201ENST00000568729 2216 ntBASIC24.42■■□□□ 1.5
TTC39AQ5SRH9 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
TTC39AQ5SRH9 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC24.42■■□□□ 1.5
TTC39AQ5SRH9 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC24.42■■□□□ 1.5
TTC39AQ5SRH9 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
TTC39AQ5SRH9 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC24.42■■□□□ 1.5
TTC39AQ5SRH9 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
TTC39AQ5SRH9 GCSHP5-201ENST00000443090 522 ntBASIC24.42■■□□□ 1.5
TTC39AQ5SRH9 AL158047.1-201ENST00000445918 881 ntBASIC24.42■■□□□ 1.5
TTC39AQ5SRH9 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC24.42■■□□□ 1.5
TTC39AQ5SRH9 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC24.42■■□□□ 1.5
TTC39AQ5SRH9 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
TTC39AQ5SRH9 RN7SL471P-201ENST00000580476 299 ntBASIC24.42■■□□□ 1.5
TTC39AQ5SRH9 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
TTC39AQ5SRH9 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC24.42■■□□□ 1.5
TTC39AQ5SRH9 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
TTC39AQ5SRH9 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
TTC39AQ5SRH9 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC24.42■■□□□ 1.5
TTC39AQ5SRH9 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC24.41■■□□□ 1.5
TTC39AQ5SRH9 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC24.41■■□□□ 1.5
TTC39AQ5SRH9 AC020907.5-201ENST00000624372 1936 ntBASIC24.41■■□□□ 1.5
TTC39AQ5SRH9 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC24.41■■□□□ 1.5
TTC39AQ5SRH9 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC24.41■■□□□ 1.5
TTC39AQ5SRH9 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC24.41■■□□□ 1.5
TTC39AQ5SRH9 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
TTC39AQ5SRH9 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC24.41■■□□□ 1.5
TTC39AQ5SRH9 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC24.41■■□□□ 1.5
TTC39AQ5SRH9 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC24.41■■□□□ 1.5
TTC39AQ5SRH9 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC24.41■■□□□ 1.5
TTC39AQ5SRH9 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC24.41■■□□□ 1.5
TTC39AQ5SRH9 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC24.41■■□□□ 1.5
TTC39AQ5SRH9 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC24.41■■□□□ 1.5
TTC39AQ5SRH9 C1QBPP2-201ENST00000528754 825 ntBASIC24.41■■□□□ 1.5
TTC39AQ5SRH9 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC24.41■■□□□ 1.5
TTC39AQ5SRH9 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC24.41■■□□□ 1.5
TTC39AQ5SRH9 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC24.41■■□□□ 1.5
TTC39AQ5SRH9 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC24.41■■□□□ 1.5
TTC39AQ5SRH9 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC24.41■■□□□ 1.5
TTC39AQ5SRH9 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC24.41■■□□□ 1.5
TTC39AQ5SRH9 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
TTC39AQ5SRH9 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
TTC39AQ5SRH9 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
TTC39AQ5SRH9 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
TTC39AQ5SRH9 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
TTC39AQ5SRH9 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
TTC39AQ5SRH9 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
TTC39AQ5SRH9 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
TTC39AQ5SRH9 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC24.4■■□□□ 1.5
TTC39AQ5SRH9 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC24.4■■□□□ 1.5
TTC39AQ5SRH9 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC24.4■■□□□ 1.5
TTC39AQ5SRH9 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
TTC39AQ5SRH9 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC24.4■■□□□ 1.5
TTC39AQ5SRH9 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms