Protein–RNA interactions for Protein: Q3SXM0

DCAF4L1, DDB1- and CUL4-associated factor 4-like protein 1, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DCAF4L1Q3SXM0 AC239809.2-201ENST00000415381 517 ntBASIC21.78■■□□□ 1.08
DCAF4L1Q3SXM0 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC21.78■■□□□ 1.08
DCAF4L1Q3SXM0 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
DCAF4L1Q3SXM0 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC21.78■■□□□ 1.08
DCAF4L1Q3SXM0 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC21.78■■□□□ 1.08
DCAF4L1Q3SXM0 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC21.78■■□□□ 1.08
DCAF4L1Q3SXM0 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC21.78■■□□□ 1.08
DCAF4L1Q3SXM0 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
DCAF4L1Q3SXM0 AL121829.2-201ENST00000620908 328 ntBASIC21.78■■□□□ 1.08
DCAF4L1Q3SXM0 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC21.78■■□□□ 1.08
DCAF4L1Q3SXM0 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
DCAF4L1Q3SXM0 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
DCAF4L1Q3SXM0 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
DCAF4L1Q3SXM0 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC21.78■■□□□ 1.08
DCAF4L1Q3SXM0 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC21.77■■□□□ 1.08
DCAF4L1Q3SXM0 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC21.77■■□□□ 1.08
DCAF4L1Q3SXM0 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC21.77■■□□□ 1.08
DCAF4L1Q3SXM0 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
DCAF4L1Q3SXM0 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
DCAF4L1Q3SXM0 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC21.77■■□□□ 1.08
DCAF4L1Q3SXM0 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC21.77■■□□□ 1.08
DCAF4L1Q3SXM0 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
DCAF4L1Q3SXM0 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
DCAF4L1Q3SXM0 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
DCAF4L1Q3SXM0 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC21.77■■□□□ 1.08
DCAF4L1Q3SXM0 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
DCAF4L1Q3SXM0 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC21.77■■□□□ 1.08
DCAF4L1Q3SXM0 AC093827.2-201ENST00000512654 315 ntBASIC21.77■■□□□ 1.08
DCAF4L1Q3SXM0 PRKY-204ENST00000533551 1019 ntBASIC21.77■■□□□ 1.08
DCAF4L1Q3SXM0 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC21.77■■□□□ 1.08
DCAF4L1Q3SXM0 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC21.77■■□□□ 1.08
DCAF4L1Q3SXM0 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC21.77■■□□□ 1.08
DCAF4L1Q3SXM0 AL121906.2-201ENST00000621597 723 ntBASIC21.77■■□□□ 1.08
DCAF4L1Q3SXM0 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC21.77■■□□□ 1.08
DCAF4L1Q3SXM0 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC21.77■■□□□ 1.07
DCAF4L1Q3SXM0 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
DCAF4L1Q3SXM0 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
DCAF4L1Q3SXM0 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
DCAF4L1Q3SXM0 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC21.76■■□□□ 1.07
DCAF4L1Q3SXM0 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC21.76■■□□□ 1.07
DCAF4L1Q3SXM0 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
DCAF4L1Q3SXM0 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
DCAF4L1Q3SXM0 SERF2-207ENST00000409614 582 ntTSL 2 BASIC21.76■■□□□ 1.07
DCAF4L1Q3SXM0 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC21.76■■□□□ 1.07
DCAF4L1Q3SXM0 AC133681.1-201ENST00000465482 601 ntBASIC21.76■■□□□ 1.07
DCAF4L1Q3SXM0 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC21.76■■□□□ 1.07
DCAF4L1Q3SXM0 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
DCAF4L1Q3SXM0 LY6E-205ENST00000519611 635 ntTSL 3 BASIC21.76■■□□□ 1.07
DCAF4L1Q3SXM0 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC21.76■■□□□ 1.07
DCAF4L1Q3SXM0 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC21.76■■□□□ 1.07
DCAF4L1Q3SXM0 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC21.76■■□□□ 1.07
DCAF4L1Q3SXM0 RHOD-202ENST00000532559 538 ntTSL 3 BASIC21.76■■□□□ 1.07
DCAF4L1Q3SXM0 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC21.76■■□□□ 1.07
DCAF4L1Q3SXM0 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC21.76■■□□□ 1.07
DCAF4L1Q3SXM0 AL023875.1-201ENST00000640777 796 ntBASIC21.76■■□□□ 1.07
DCAF4L1Q3SXM0 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
DCAF4L1Q3SXM0 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
DCAF4L1Q3SXM0 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
DCAF4L1Q3SXM0 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
DCAF4L1Q3SXM0 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
DCAF4L1Q3SXM0 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
DCAF4L1Q3SXM0 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC21.75■■□□□ 1.07
DCAF4L1Q3SXM0 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
DCAF4L1Q3SXM0 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
DCAF4L1Q3SXM0 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC21.75■■□□□ 1.07
DCAF4L1Q3SXM0 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
DCAF4L1Q3SXM0 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
DCAF4L1Q3SXM0 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
DCAF4L1Q3SXM0 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC21.75■■□□□ 1.07
DCAF4L1Q3SXM0 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC21.75■■□□□ 1.07
DCAF4L1Q3SXM0 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC21.75■■□□□ 1.07
DCAF4L1Q3SXM0 AC124016.1-201ENST00000609552 612 ntBASIC21.75■■□□□ 1.07
DCAF4L1Q3SXM0 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
DCAF4L1Q3SXM0 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
DCAF4L1Q3SXM0 AC124283.5-201ENST00000624661 1809 ntBASIC21.75■■□□□ 1.07
DCAF4L1Q3SXM0 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
DCAF4L1Q3SXM0 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
DCAF4L1Q3SXM0 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
DCAF4L1Q3SXM0 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
DCAF4L1Q3SXM0 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC21.74■■□□□ 1.07
DCAF4L1Q3SXM0 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC21.74■■□□□ 1.07
DCAF4L1Q3SXM0 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC21.74■■□□□ 1.07
DCAF4L1Q3SXM0 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC21.74■■□□□ 1.07
DCAF4L1Q3SXM0 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
DCAF4L1Q3SXM0 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
DCAF4L1Q3SXM0 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
DCAF4L1Q3SXM0 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
DCAF4L1Q3SXM0 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
DCAF4L1Q3SXM0 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
DCAF4L1Q3SXM0 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC21.74■■□□□ 1.07
DCAF4L1Q3SXM0 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC21.74■■□□□ 1.07
DCAF4L1Q3SXM0 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
DCAF4L1Q3SXM0 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
DCAF4L1Q3SXM0 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
DCAF4L1Q3SXM0 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC21.73■■□□□ 1.07
DCAF4L1Q3SXM0 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
DCAF4L1Q3SXM0 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
DCAF4L1Q3SXM0 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
DCAF4L1Q3SXM0 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
DCAF4L1Q3SXM0 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms