Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC21.53■■□□□ 1.04
CTC1Q2NKJ3 MOK-233ENST00000524214 1539 ntTSL 2 BASIC21.53■■□□□ 1.04
CTC1Q2NKJ3 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC21.53■■□□□ 1.04
CTC1Q2NKJ3 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC21.53■■□□□ 1.04
CTC1Q2NKJ3 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CTC1Q2NKJ3 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CTC1Q2NKJ3 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CTC1Q2NKJ3 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CTC1Q2NKJ3 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC21.53■■□□□ 1.04
CTC1Q2NKJ3 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CTC1Q2NKJ3 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CTC1Q2NKJ3 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
CTC1Q2NKJ3 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CTC1Q2NKJ3 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CTC1Q2NKJ3 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC21.52■■□□□ 1.04
CTC1Q2NKJ3 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CTC1Q2NKJ3 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC21.52■■□□□ 1.04
CTC1Q2NKJ3 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC21.52■■□□□ 1.04
CTC1Q2NKJ3 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CTC1Q2NKJ3 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC21.52■■□□□ 1.04
CTC1Q2NKJ3 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC21.52■■□□□ 1.03
CTC1Q2NKJ3 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC21.52■■□□□ 1.03
CTC1Q2NKJ3 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
CTC1Q2NKJ3 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC21.52■■□□□ 1.03
CTC1Q2NKJ3 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
CTC1Q2NKJ3 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC21.52■■□□□ 1.03
CTC1Q2NKJ3 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CTC1Q2NKJ3 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
CTC1Q2NKJ3 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
CTC1Q2NKJ3 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CTC1Q2NKJ3 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC21.51■■□□□ 1.03
CTC1Q2NKJ3 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CTC1Q2NKJ3 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
CTC1Q2NKJ3 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CTC1Q2NKJ3 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC21.51■■□□□ 1.03
CTC1Q2NKJ3 AL390719.1-204ENST00000412397 1219 ntBASIC21.51■■□□□ 1.03
CTC1Q2NKJ3 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC21.51■■□□□ 1.03
CTC1Q2NKJ3 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC21.51■■□□□ 1.03
CTC1Q2NKJ3 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC21.51■■□□□ 1.03
CTC1Q2NKJ3 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC21.51■■□□□ 1.03
CTC1Q2NKJ3 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC21.51■■□□□ 1.03
CTC1Q2NKJ3 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC21.51■■□□□ 1.03
CTC1Q2NKJ3 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CTC1Q2NKJ3 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CTC1Q2NKJ3 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
CTC1Q2NKJ3 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC21.51■■□□□ 1.03
CTC1Q2NKJ3 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
CTC1Q2NKJ3 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CTC1Q2NKJ3 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
CTC1Q2NKJ3 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CTC1Q2NKJ3 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
CTC1Q2NKJ3 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CTC1Q2NKJ3 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC21.5■■□□□ 1.03
CTC1Q2NKJ3 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CTC1Q2NKJ3 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC21.5■■□□□ 1.03
CTC1Q2NKJ3 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC21.5■■□□□ 1.03
CTC1Q2NKJ3 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CTC1Q2NKJ3 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC21.5■■□□□ 1.03
CTC1Q2NKJ3 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC21.5■■□□□ 1.03
CTC1Q2NKJ3 MIR6786-201ENST00000616843 113 ntBASIC21.5■■□□□ 1.03
CTC1Q2NKJ3 AC005363.2-201ENST00000618631 242 ntBASIC21.5■■□□□ 1.03
CTC1Q2NKJ3 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC21.5■■□□□ 1.03
CTC1Q2NKJ3 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CTC1Q2NKJ3 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC21.5■■□□□ 1.03
CTC1Q2NKJ3 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CTC1Q2NKJ3 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC21.5■■□□□ 1.03
CTC1Q2NKJ3 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC21.5■■□□□ 1.03
CTC1Q2NKJ3 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
CTC1Q2NKJ3 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
CTC1Q2NKJ3 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CTC1Q2NKJ3 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC21.49■■□□□ 1.03
CTC1Q2NKJ3 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC21.49■■□□□ 1.03
CTC1Q2NKJ3 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC21.49■■□□□ 1.03
CTC1Q2NKJ3 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC21.49■■□□□ 1.03
CTC1Q2NKJ3 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC21.49■■□□□ 1.03
CTC1Q2NKJ3 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC21.49■■□□□ 1.03
CTC1Q2NKJ3 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC21.49■■□□□ 1.03
CTC1Q2NKJ3 RMI2-205ENST00000576027 818 ntTSL 2 BASIC21.49■■□□□ 1.03
CTC1Q2NKJ3 RPS15-203ENST00000586096 570 ntTSL 2 BASIC21.49■■□□□ 1.03
CTC1Q2NKJ3 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC21.49■■□□□ 1.03
CTC1Q2NKJ3 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CTC1Q2NKJ3 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CTC1Q2NKJ3 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CTC1Q2NKJ3 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC21.48■■□□□ 1.03
CTC1Q2NKJ3 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC21.48■■□□□ 1.03
CTC1Q2NKJ3 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC21.48■■□□□ 1.03
CTC1Q2NKJ3 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CTC1Q2NKJ3 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
CTC1Q2NKJ3 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CTC1Q2NKJ3 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC21.48■■□□□ 1.03
CTC1Q2NKJ3 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC21.48■■□□□ 1.03
CTC1Q2NKJ3 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CTC1Q2NKJ3 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC21.48■■□□□ 1.03
CTC1Q2NKJ3 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC21.48■■□□□ 1.03
CTC1Q2NKJ3 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC21.48■■□□□ 1.03
CTC1Q2NKJ3 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CTC1Q2NKJ3 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CTC1Q2NKJ3 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CTC1Q2NKJ3 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
CTC1Q2NKJ3 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms