Protein–RNA interactions for Protein: Q2MKA7

RSPO1, R-spondin-1, humanhuman

Predicted RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO1Q2MKA7 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
RSPO1Q2MKA7 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
RSPO1Q2MKA7 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC17.41■□□□□ 0.38
RSPO1Q2MKA7 LSM12P1-201ENST00000411836 588 ntBASIC17.41■□□□□ 0.38
RSPO1Q2MKA7 MIPEPP3-201ENST00000412105 444 ntBASIC17.41■□□□□ 0.38
RSPO1Q2MKA7 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
RSPO1Q2MKA7 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC17.41■□□□□ 0.38
RSPO1Q2MKA7 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC17.41■□□□□ 0.38
RSPO1Q2MKA7 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RSPO1Q2MKA7 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RSPO1Q2MKA7 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RSPO1Q2MKA7 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
RSPO1Q2MKA7 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RSPO1Q2MKA7 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC17.4■□□□□ 0.38
RSPO1Q2MKA7 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
RSPO1Q2MKA7 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RSPO1Q2MKA7 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RSPO1Q2MKA7 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RSPO1Q2MKA7 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC17.4■□□□□ 0.38
RSPO1Q2MKA7 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RSPO1Q2MKA7 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RSPO1Q2MKA7 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RSPO1Q2MKA7 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RSPO1Q2MKA7 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC17.4■□□□□ 0.38
RSPO1Q2MKA7 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
RSPO1Q2MKA7 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RSPO1Q2MKA7 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RSPO1Q2MKA7 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RSPO1Q2MKA7 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
RSPO1Q2MKA7 AL031963.3-201ENST00000606441 850 ntBASIC17.4■□□□□ 0.38
RSPO1Q2MKA7 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC17.4■□□□□ 0.38
RSPO1Q2MKA7 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RSPO1Q2MKA7 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RSPO1Q2MKA7 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
RSPO1Q2MKA7 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
RSPO1Q2MKA7 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC17.4■□□□□ 0.38
RSPO1Q2MKA7 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC17.39■□□□□ 0.38
RSPO1Q2MKA7 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
RSPO1Q2MKA7 MOK-225ENST00000522867 1883 ntTSL 5 BASIC17.39■□□□□ 0.38
RSPO1Q2MKA7 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.38
RSPO1Q2MKA7 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RSPO1Q2MKA7 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
RSPO1Q2MKA7 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RSPO1Q2MKA7 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
RSPO1Q2MKA7 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
RSPO1Q2MKA7 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RSPO1Q2MKA7 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RSPO1Q2MKA7 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
RSPO1Q2MKA7 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
RSPO1Q2MKA7 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC17.39■□□□□ 0.37
RSPO1Q2MKA7 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RSPO1Q2MKA7 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RSPO1Q2MKA7 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RSPO1Q2MKA7 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
RSPO1Q2MKA7 GPX1P1-201ENST00000388829 606 ntBASIC17.39■□□□□ 0.37
RSPO1Q2MKA7 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC17.39■□□□□ 0.37
RSPO1Q2MKA7 AC006970.2-201ENST00000450065 779 ntBASIC17.39■□□□□ 0.37
RSPO1Q2MKA7 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC17.39■□□□□ 0.37
RSPO1Q2MKA7 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC17.39■□□□□ 0.37
RSPO1Q2MKA7 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RSPO1Q2MKA7 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC17.39■□□□□ 0.37
RSPO1Q2MKA7 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
RSPO1Q2MKA7 WT1-AS_3.1-201ENST00000613262 234 ntBASIC17.39■□□□□ 0.37
RSPO1Q2MKA7 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RSPO1Q2MKA7 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RSPO1Q2MKA7 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RSPO1Q2MKA7 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RSPO1Q2MKA7 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RSPO1Q2MKA7 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RSPO1Q2MKA7 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RSPO1Q2MKA7 KRT8P20-201ENST00000423953 1409 ntBASIC17.38■□□□□ 0.37
RSPO1Q2MKA7 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RSPO1Q2MKA7 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
RSPO1Q2MKA7 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RSPO1Q2MKA7 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RSPO1Q2MKA7 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
RSPO1Q2MKA7 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RSPO1Q2MKA7 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RSPO1Q2MKA7 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
RSPO1Q2MKA7 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RSPO1Q2MKA7 TSPY6P-201ENST00000448518 926 ntBASIC17.38■□□□□ 0.37
RSPO1Q2MKA7 AC023632.3-201ENST00000521633 145 ntBASIC17.38■□□□□ 0.37
RSPO1Q2MKA7 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC17.38■□□□□ 0.37
RSPO1Q2MKA7 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
RSPO1Q2MKA7 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RSPO1Q2MKA7 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC17.38■□□□□ 0.37
RSPO1Q2MKA7 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RSPO1Q2MKA7 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC17.38■□□□□ 0.37
RSPO1Q2MKA7 TMEM179-206ENST00000616017 1645 ntBASIC17.38■□□□□ 0.37
RSPO1Q2MKA7 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
RSPO1Q2MKA7 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RSPO1Q2MKA7 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC17.38■□□□□ 0.37
RSPO1Q2MKA7 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
RSPO1Q2MKA7 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RSPO1Q2MKA7 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RSPO1Q2MKA7 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RSPO1Q2MKA7 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RSPO1Q2MKA7 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
RSPO1Q2MKA7 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RSPO1Q2MKA7 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms