Protein–RNA interactions for Protein: Q15768

EFNB3, Ephrin-B3, humanhuman

Predictions only

Length 340 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB3Q15768 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
EFNB3Q15768 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC17.14■□□□□ 0.33
EFNB3Q15768 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC17.14■□□□□ 0.33
EFNB3Q15768 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
EFNB3Q15768 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC17.14■□□□□ 0.33
EFNB3Q15768 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC17.14■□□□□ 0.33
EFNB3Q15768 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
EFNB3Q15768 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
EFNB3Q15768 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
EFNB3Q15768 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
EFNB3Q15768 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
EFNB3Q15768 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC17.14■□□□□ 0.33
EFNB3Q15768 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
EFNB3Q15768 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC17.14■□□□□ 0.33
EFNB3Q15768 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
EFNB3Q15768 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC17.13■□□□□ 0.33
EFNB3Q15768 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
EFNB3Q15768 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
EFNB3Q15768 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
EFNB3Q15768 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
EFNB3Q15768 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
EFNB3Q15768 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC17.13■□□□□ 0.33
EFNB3Q15768 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC17.13■□□□□ 0.33
EFNB3Q15768 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC17.13■□□□□ 0.33
EFNB3Q15768 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC17.13■□□□□ 0.33
EFNB3Q15768 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC17.13■□□□□ 0.33
EFNB3Q15768 AL121603.2-201ENST00000557373 2117 ntBASIC17.13■□□□□ 0.33
EFNB3Q15768 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC17.13■□□□□ 0.33
EFNB3Q15768 USP36-216ENST00000589424 970 ntTSL 5 BASIC17.13■□□□□ 0.33
EFNB3Q15768 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC17.13■□□□□ 0.33
EFNB3Q15768 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
EFNB3Q15768 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC17.13■□□□□ 0.33
EFNB3Q15768 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
EFNB3Q15768 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
EFNB3Q15768 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC17.13■□□□□ 0.33
EFNB3Q15768 PTBP1P-201ENST00000554374 1601 ntBASIC17.13■□□□□ 0.33
EFNB3Q15768 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
EFNB3Q15768 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC17.13■□□□□ 0.33
EFNB3Q15768 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
EFNB3Q15768 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
EFNB3Q15768 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
EFNB3Q15768 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC17.12■□□□□ 0.33
EFNB3Q15768 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
EFNB3Q15768 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
EFNB3Q15768 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC17.12■□□□□ 0.33
EFNB3Q15768 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
EFNB3Q15768 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC17.12■□□□□ 0.33
EFNB3Q15768 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
EFNB3Q15768 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC17.12■□□□□ 0.33
EFNB3Q15768 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
EFNB3Q15768 AL031963.3-201ENST00000606441 850 ntBASIC17.12■□□□□ 0.33
EFNB3Q15768 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
EFNB3Q15768 AL121829.2-201ENST00000620908 328 ntBASIC17.12■□□□□ 0.33
EFNB3Q15768 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
EFNB3Q15768 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
EFNB3Q15768 MME-217ENST00000616757 1315 ntTSL 5 BASIC17.12■□□□□ 0.33
EFNB3Q15768 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
EFNB3Q15768 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC17.12■□□□□ 0.33
EFNB3Q15768 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
EFNB3Q15768 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
EFNB3Q15768 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
EFNB3Q15768 AC005229.4-201ENST00000610085 2198 ntBASIC17.12■□□□□ 0.33
EFNB3Q15768 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
EFNB3Q15768 KRT8P20-201ENST00000423953 1409 ntBASIC17.12■□□□□ 0.33
EFNB3Q15768 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC17.12■□□□□ 0.33
EFNB3Q15768 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
EFNB3Q15768 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
EFNB3Q15768 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
EFNB3Q15768 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
EFNB3Q15768 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
EFNB3Q15768 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
EFNB3Q15768 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC17.11■□□□□ 0.33
EFNB3Q15768 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
EFNB3Q15768 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
EFNB3Q15768 SERF2-207ENST00000409614 582 ntTSL 2 BASIC17.11■□□□□ 0.33
EFNB3Q15768 AC239809.2-201ENST00000415381 517 ntBASIC17.11■□□□□ 0.33
EFNB3Q15768 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC17.11■□□□□ 0.33
EFNB3Q15768 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC17.11■□□□□ 0.33
EFNB3Q15768 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC17.11■□□□□ 0.33
EFNB3Q15768 AC008550.1-201ENST00000511500 884 ntBASIC17.11■□□□□ 0.33
EFNB3Q15768 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC17.11■□□□□ 0.33
EFNB3Q15768 LY6E-205ENST00000519611 635 ntTSL 3 BASIC17.11■□□□□ 0.33
EFNB3Q15768 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
EFNB3Q15768 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC17.11■□□□□ 0.33
EFNB3Q15768 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC17.11■□□□□ 0.33
EFNB3Q15768 PRKY-204ENST00000533551 1019 ntBASIC17.11■□□□□ 0.33
EFNB3Q15768 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC17.11■□□□□ 0.33
EFNB3Q15768 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
EFNB3Q15768 AC124016.1-201ENST00000609552 612 ntBASIC17.11■□□□□ 0.33
EFNB3Q15768 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
EFNB3Q15768 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
EFNB3Q15768 FP700111.2-201ENST00000619190 1892 ntBASIC17.11■□□□□ 0.33
EFNB3Q15768 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC17.11■□□□□ 0.33
EFNB3Q15768 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
EFNB3Q15768 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
EFNB3Q15768 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
EFNB3Q15768 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
EFNB3Q15768 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
EFNB3Q15768 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
EFNB3Q15768 AC007225.1-201ENST00000566331 1836 ntBASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms