Protein–RNA interactions for Protein: Q05919

VPS38, Vacuolar protein sorting-associated protein 38, yeastyeast

Predictions only

Length 439 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS38Q05919 SPT21YMR179W 2277 nt1.38□□□□□ -2.19
VPS38Q05919 DBP6YNR038W 1890 nt1.38□□□□□ -2.19
VPS38Q05919 SEC21YNL287W 2808 nt1.38□□□□□ -2.19
VPS38Q05919 PIP2YOR363C 2991 nt1.38□□□□□ -2.19
VPS38Q05919 CUL3YGR003W 2235 nt1.38□□□□□ -2.19
VPS38Q05919 STE5YDR103W 2754 nt1.37□□□□□ -2.19
VPS38Q05919 AIM44YPL158C 2277 nt1.37□□□□□ -2.19
VPS38Q05919 IFH1YLR223C 3258 nt1.37□□□□□ -2.19
VPS38Q05919 YPR063CYPR063C 423 nt1.37□□□□□ -2.19
VPS38Q05919 RPL34BYIL052C 366 nt1.36□□□□□ -2.19
VPS38Q05919 YMR031W-AYMR031W-A 327 nt1.36□□□□□ -2.19
VPS38Q05919 MMS4YBR098W 2076 nt1.36□□□□□ -2.19
VPS38Q05919 PKH2YOL100W 3246 nt1.35□□□□□ -2.19
VPS38Q05919 YMR193C-AYMR193C-A 387 nt1.35□□□□□ -2.19
VPS38Q05919 RPL33BYOR234C 324 nt1.35□□□□□ -2.19
VPS38Q05919 PBY1YBR094W 2262 nt1.35□□□□□ -2.19
VPS38Q05919 CLU1YMR012W 3834 nt1.34□□□□□ -2.19
VPS38Q05919 YLR422WYLR422W 5799 nt1.34□□□□□ -2.19
VPS38Q05919 YBL008W-AYBL008W-A 240 nt1.34□□□□□ -2.19
VPS38Q05919 PTP2YOR208W 2253 nt1.34□□□□□ -2.2
VPS38Q05919 NUP188YML103C 4968 nt1.34□□□□□ -2.2
VPS38Q05919 YCK3YER123W 1575 nt1.34□□□□□ -2.2
VPS38Q05919 MSH3YCR092C 3057 nt1.34□□□□□ -2.2
VPS38Q05919 APL3YBL037W 3078 nt1.33□□□□□ -2.2
VPS38Q05919 tH(GUG)E1tH(GUG)E1 72 nt1.33□□□□□ -2.2
VPS38Q05919 tH(GUG)E2tH(GUG)E2 72 nt1.33□□□□□ -2.2
VPS38Q05919 tH(GUG)G1tH(GUG)G1 72 nt1.33□□□□□ -2.2
VPS38Q05919 tH(GUG)G2tH(GUG)G2 72 nt1.33□□□□□ -2.2
VPS38Q05919 tH(GUG)HtH(GUG)H 72 nt1.33□□□□□ -2.2
VPS38Q05919 tH(GUG)KtH(GUG)K 72 nt1.33□□□□□ -2.2
VPS38Q05919 tH(GUG)MtH(GUG)M 72 nt1.33□□□□□ -2.2
VPS38Q05919 GPG1YGL121C 381 nt1.33□□□□□ -2.2
VPS38Q05919 YLL020CYLL020C 306 nt1.33□□□□□ -2.2
VPS38Q05919 YLL007CYLL007C 1998 nt1.33□□□□□ -2.2
VPS38Q05919 PAN2YGL094C 3348 nt1.32□□□□□ -2.2
VPS38Q05919 YDL206WYDL206W 2289 nt1.32□□□□□ -2.2
VPS38Q05919 NUP145YGL092W 3954 nt1.32□□□□□ -2.2
VPS38Q05919 YIL032CYIL032C 357 nt1.32□□□□□ -2.2
VPS38Q05919 FIG4YNL325C 2640 nt1.32□□□□□ -2.2
VPS38Q05919 SET3YKR029C 2256 nt1.31□□□□□ -2.2
VPS38Q05919 YDR521WYDR521W 336 nt1.31□□□□□ -2.2
VPS38Q05919 RSM22YKL155C 1887 nt1.31□□□□□ -2.2
VPS38Q05919 SLD3YGL113W 2007 nt1.3□□□□□ -2.2
VPS38Q05919 SSS1YDR086C 243 nt1.3□□□□□ -2.2
VPS38Q05919 YIL020C-AYIL020C-A 339 nt1.3□□□□□ -2.2
VPS38Q05919 YBR221W-AYBR221W-A 105 nt1.3□□□□□ -2.2
VPS38Q05919 MDS3YGL197W 4464 nt1.29□□□□□ -2.2
VPS38Q05919 HMRA2YCR096C 360 nt1.29□□□□□ -2.2
VPS38Q05919 YHL042WYHL042W 453 nt1.29□□□□□ -2.2
VPS38Q05919 RRT15YLR162W-A 189 nt1.29□□□□□ -2.2
VPS38Q05919 SPO75YLL005C 2607 nt1.29□□□□□ -2.2
VPS38Q05919 PDE2YOR360C 1581 nt1.29□□□□□ -2.2
VPS38Q05919 SEC3YER008C 4011 nt1.29□□□□□ -2.2
VPS38Q05919 snR60snR60 104 nt1.28□□□□□ -2.2
VPS38Q05919 YDR344CYDR344C 444 nt1.28□□□□□ -2.2
VPS38Q05919 ALG13YGL047W 609 nt1.28□□□□□ -2.2
VPS38Q05919 YIL115W-AYIL115W-A 372 nt1.28□□□□□ -2.2
VPS38Q05919 STO1YMR125W 2586 nt1.28□□□□□ -2.2
VPS38Q05919 snR65snR65 100 nt1.27□□□□□ -2.21
VPS38Q05919 YJL120WYJL120W 324 nt1.27□□□□□ -2.21
VPS38Q05919 YAR009CYAR009C 3591 nt1.26□□□□□ -2.21
VPS38Q05919 CDC36YDL165W 576 nt1.26□□□□□ -2.21
VPS38Q05919 RPS25BYLR333C 327 nt1.26□□□□□ -2.21
VPS38Q05919 YBR206WYBR206W 324 nt1.26□□□□□ -2.21
VPS38Q05919 EAF1YDR359C 2949 nt1.26□□□□□ -2.21
VPS38Q05919 ROM2YLR371W 4071 nt1.25□□□□□ -2.21
VPS38Q05919 STB6YKL072W 2301 nt1.25□□□□□ -2.21
VPS38Q05919 VIK1YPL253C 1944 nt1.25□□□□□ -2.21
VPS38Q05919 YNL284C-BYNL284C-B 5268 nt1.24□□□□□ -2.21
VPS38Q05919 RAD9YDR217C 3930 nt1.24□□□□□ -2.21
VPS38Q05919 YMR321CYMR321C 318 nt1.24□□□□□ -2.21
VPS38Q05919 YBR200W-AYBR200W-A 165 nt1.24□□□□□ -2.21
VPS38Q05919 COG8YML071C 1824 nt1.24□□□□□ -2.21
VPS38Q05919 CDC39YCR093W 6327 nt1.23□□□□□ -2.21
VPS38Q05919 INA22YIR024C 651 nt1.23□□□□□ -2.21
VPS38Q05919 SPO21YOL091W 1830 nt1.22□□□□□ -2.21
VPS38Q05919 NUP157YER105C 4176 nt1.21□□□□□ -2.22
VPS38Q05919 ANS1YHR126C 480 nt1.21□□□□□ -2.22
VPS38Q05919 WAR1YML076C 2835 nt1.2□□□□□ -2.22
VPS38Q05919 RPS27BYHR021C 249 nt1.2□□□□□ -2.22
VPS38Q05919 YNL028WYNL028W 318 nt1.2□□□□□ -2.22
VPS38Q05919 CSE2YNR010W 450 nt1.2□□□□□ -2.22
VPS38Q05919 YOR218CYOR218C 420 nt1.2□□□□□ -2.22
VPS38Q05919 YOR231C-AYOR231C-A 201 nt1.2□□□□□ -2.22
VPS38Q05919 RAD61YDR014W 1944 nt1.19□□□□□ -2.22
VPS38Q05919 YNL277W-AYNL277W-A 189 nt1.19□□□□□ -2.22
VPS38Q05919 YOR011W-AYOR011W-A 207 nt1.19□□□□□ -2.22
VPS38Q05919 YPR010C-AYPR010C-A 219 nt1.19□□□□□ -2.22
VPS38Q05919 SMC1YFL008W 3678 nt1.18□□□□□ -2.22
VPS38Q05919 YGR069WYGR069W 336 nt1.18□□□□□ -2.22
VPS38Q05919 YBR064WYBR064W 429 nt1.18□□□□□ -2.22
VPS38Q05919 NST1YNL091W 3723 nt1.17□□□□□ -2.22
VPS38Q05919 SPT7YBR081C 3999 nt1.17□□□□□ -2.22
VPS38Q05919 YER181CYER181C 324 nt1.17□□□□□ -2.22
VPS38Q05919 YOR008C-AYOR008C-A 225 nt1.17□□□□□ -2.22
VPS38Q05919 SIP4YJL089W 2490 nt1.16□□□□□ -2.22
VPS38Q05919 BEM2YER155C 6504 nt1.15□□□□□ -2.22
VPS38Q05919 VAM6YDL077C 3150 nt1.14□□□□□ -2.23
VPS38Q05919 YML099W-AYML099W-A 330 nt1.14□□□□□ -2.23
VPS38Q05919 IES4YOR189W 351 nt1.14□□□□□ -2.23
Retrieved 100 of 7,029 protein–RNA pairs in 63.1 ms