Protein–RNA interactions for Protein: Q04781

RKR1, E3 ubiquitin-protein ligase listerin, yeastyeast

Predictions only

Length 1,562 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RKR1Q04781 YOL160WYOL160W 342 nt-2.11□□□□□ -2.75
RKR1Q04781 UBS1YBR165W 834 nt-2.11□□□□□ -2.75
RKR1Q04781 SNU56YDR240C 1479 nt-2.12□□□□□ -2.75
RKR1Q04781 YHL048C-AYHL048C-A 135 nt-2.12□□□□□ -2.75
RKR1Q04781 YBL062WYBL062W 381 nt-2.12□□□□□ -2.75
RKR1Q04781 YGL258W-AYGL258W-A 234 nt-2.14□□□□□ -2.75
RKR1Q04781 YJL114WYJL114W 681 nt-2.15□□□□□ -2.75
RKR1Q04781 ATG31YDR022C 591 nt-2.16□□□□□ -2.76
RKR1Q04781 PAA1YDR071C 576 nt-2.16□□□□□ -2.76
RKR1Q04781 YLL032CYLL032C 2478 nt-2.16□□□□□ -2.76
RKR1Q04781 YDL152WYDL152W 366 nt-2.17□□□□□ -2.76
RKR1Q04781 YKL065W-AYKL065W-A 222 nt-2.17□□□□□ -2.76
RKR1Q04781 FAR3YMR052W 615 nt-2.17□□□□□ -2.76
RKR1Q04781 LSO2YGR169C-A 279 nt-2.19□□□□□ -2.76
RKR1Q04781 YAL069WYAL069W 315 nt-2.19□□□□□ -2.76
RKR1Q04781 Q0142Q0142 177 nt-2.2□□□□□ -2.76
RKR1Q04781 YML047W-AYML047W-A 366 nt-2.2□□□□□ -2.76
RKR1Q04781 HUR1YGL168W 333 nt-2.23□□□□□ -2.77
RKR1Q04781 YPL068CYPL068C 882 nt-2.23□□□□□ -2.77
RKR1Q04781 tN(GUU)QtN(GUU)Q 71 nt-2.23□□□□□ -2.77
RKR1Q04781 YIL089WYIL089W 618 nt-2.23□□□□□ -2.77
RKR1Q04781 GPX1YKL026C 504 nt-2.24□□□□□ -2.77
RKR1Q04781 YPR074W-AYPR074W-A 171 nt-2.24□□□□□ -2.77
RKR1Q04781 ZIP2YGL249W 2115 nt-2.25□□□□□ -2.77
RKR1Q04781 RSM23YGL129C 1353 nt-2.25□□□□□ -2.77
RKR1Q04781 RRI2YOL117W 1938 nt-2.26□□□□□ -2.77
RKR1Q04781 YCR100CYCR100C 951 nt-2.26□□□□□ -2.77
RKR1Q04781 MRPL31YKL138C 396 nt-2.26□□□□□ -2.77
RKR1Q04781 YPL119C-AYPL119C-A 264 nt-2.26□□□□□ -2.77
RKR1Q04781 YGL006W-AYGL006W-A 111 nt-2.27□□□□□ -2.77
RKR1Q04781 YLR198CYLR198C 360 nt-2.27□□□□□ -2.77
RKR1Q04781 YLR271WYLR271W 825 nt-2.27□□□□□ -2.77
RKR1Q04781 YHL046W-AYHL046W-A 327 nt-2.27□□□□□ -2.77
RKR1Q04781 YDR008CYDR008C 351 nt-2.29□□□□□ -2.78
RKR1Q04781 YAP6YDR259C 1152 nt-2.29□□□□□ -2.78
RKR1Q04781 YBR099CYBR099C 384 nt-2.3□□□□□ -2.78
RKR1Q04781 RUB1YDR139C 234 nt-2.31□□□□□ -2.78
RKR1Q04781 YJL032WYJL032W 315 nt-2.31□□□□□ -2.78
RKR1Q04781 YMR158C-AYMR158C-A 138 nt-2.31□□□□□ -2.78
RKR1Q04781 YLR041WYLR041W 321 nt-2.32□□□□□ -2.78
RKR1Q04781 VPS20YMR077C 666 nt-2.33□□□□□ -2.78
RKR1Q04781 YBR051WYBR051W 351 nt-2.34□□□□□ -2.78
RKR1Q04781 YJL182CYJL182C 318 nt-2.35□□□□□ -2.79
RKR1Q04781 APQ12YIL040W 417 nt-2.36□□□□□ -2.79
RKR1Q04781 YMR290W-AYMR290W-A 348 nt-2.36□□□□□ -2.79
RKR1Q04781 YGL182CYGL182C 324 nt-2.36□□□□□ -2.79
RKR1Q04781 PSF2YJL072C 642 nt-2.38□□□□□ -2.79
RKR1Q04781 YMR254CYMR254C 309 nt-2.38□□□□□ -2.79
RKR1Q04781 PAU9YBL108C-A 129 nt-2.38□□□□□ -2.79
RKR1Q04781 YMR153C-AYMR153C-A 336 nt-2.39□□□□□ -2.79
RKR1Q04781 SNU13YEL026W 381 nt-2.4□□□□□ -2.79
RKR1Q04781 YCR024C-BYCR024C-B 267 nt-2.42□□□□□ -2.8
RKR1Q04781 YJL135WYJL135W 318 nt-2.42□□□□□ -2.8
RKR1Q04781 SUT2YPR009W 807 nt-2.42□□□□□ -2.8
RKR1Q04781 PMP2YEL017C-A 132 nt-2.43□□□□□ -2.8
RKR1Q04781 YER076W-AYER076W-A 348 nt-2.44□□□□□ -2.8
RKR1Q04781 YLR146W-AYLR146W-A 189 nt-2.44□□□□□ -2.8
RKR1Q04781 DCP1YOL149W 696 nt-2.44□□□□□ -2.8
RKR1Q04781 GOS1YHL031C 672 nt-2.44□□□□□ -2.8
RKR1Q04781 LIN1YHR156C 1023 nt-2.44□□□□□ -2.8
RKR1Q04781 BLI1YKL061W 342 nt-2.45□□□□□ -2.8
RKR1Q04781 YPR099CYPR099C 357 nt-2.45□□□□□ -2.8
RKR1Q04781 YKL115CYKL115C 393 nt-2.46□□□□□ -2.8
RKR1Q04781 RPS10BYMR230W 318 nt-2.46□□□□□ -2.8
RKR1Q04781 YOL029CYOL029C 606 nt-2.46□□□□□ -2.8
RKR1Q04781 YKL063CYKL063C 504 nt-2.47□□□□□ -2.8
RKR1Q04781 SDS22YKL193C 1017 nt-2.47□□□□□ -2.8
RKR1Q04781 15S_rRNA15S_rRNA 1649 nt-2.47□□□□□ -2.8
RKR1Q04781 YHL012WYHL012W 1482 nt-2.48□□□□□ -2.81
RKR1Q04781 YHL041WYHL041W 450 nt-2.48□□□□□ -2.81
RKR1Q04781 YML100W-AYML100W-A 174 nt-2.48□□□□□ -2.81
RKR1Q04781 PAN3YKL025C 2040 nt-2.49□□□□□ -2.81
RKR1Q04781 SMD2YLR275W 333 nt-2.49□□□□□ -2.81
RKR1Q04781 PBI2YNL015W 228 nt-2.49□□□□□ -2.81
RKR1Q04781 RDS3YPR094W 324 nt-2.49□□□□□ -2.81
RKR1Q04781 EAF6YJR082C 342 nt-2.5□□□□□ -2.81
RKR1Q04781 YBL008W-AYBL008W-A 240 nt-2.51□□□□□ -2.81
RKR1Q04781 RPL29YFR032C-A 180 nt-2.52□□□□□ -2.81
RKR1Q04781 ATP20YPR020W 348 nt-2.52□□□□□ -2.81
RKR1Q04781 YLR171WYLR171W 390 nt-2.53□□□□□ -2.81
RKR1Q04781 YER138W-AYER138W-A 105 nt-2.54□□□□□ -2.82
RKR1Q04781 YMR307C-AYMR307C-A 195 nt-2.54□□□□□ -2.82
RKR1Q04781 YPL182CYPL182C 384 nt-2.54□□□□□ -2.82
RKR1Q04781 YKL068W-AYKL068W-A 237 nt-2.55□□□□□ -2.82
RKR1Q04781 YLR154W-FYLR154W-F 141 nt-2.57□□□□□ -2.82
RKR1Q04781 YER158W-AYER158W-A 216 nt-2.57□□□□□ -2.82
RKR1Q04781 YGR204C-AYGR204C-A 114 nt-2.57□□□□□ -2.82
RKR1Q04781 YER084W-AYER084W-A 513 nt-2.58□□□□□ -2.82
RKR1Q04781 YJL020W-AYJL020W-A 258 nt-2.58□□□□□ -2.82
RKR1Q04781 YPR142CYPR142C 564 nt-2.58□□□□□ -2.82
RKR1Q04781 CMS1YLR003C 876 nt-2.59□□□□□ -2.82
RKR1Q04781 SPO12YHR152W 522 nt-2.6□□□□□ -2.83
RKR1Q04781 YML108WYML108W 318 nt-2.61□□□□□ -2.83
RKR1Q04781 YNL067W-AYNL067W-A 147 nt-2.61□□□□□ -2.83
RKR1Q04781 YIL002W-AYIL002W-A 210 nt-2.61□□□□□ -2.83
RKR1Q04781 snR79snR79 84 nt-2.63□□□□□ -2.83
RKR1Q04781 YDL185C-AYDL185C-A 228 nt-2.66□□□□□ -2.84
RKR1Q04781 YGL042CYGL042C 306 nt-2.66□□□□□ -2.84
RKR1Q04781 VAM3YOR106W 852 nt-2.66□□□□□ -2.84
RKR1Q04781 LRP1YHR081W 555 nt-2.67□□□□□ -2.84
Retrieved 100 of 7,029 protein–RNA pairs in 14.2 ms